| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1383 |
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| Symbol | |
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| ID | 4603635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1673968 |
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| End bp | 1676028 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780733 |
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| Product | prolyl oligopeptidase family protein |
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| Protein accession | YP_927260 |
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| Protein GI | 119774520 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0322125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTTG GCATTGGGCA CCGCGTTGCG GCGATTTGCT TAATGACACT GGCACTGCTG
GGGTGTGAGC CCGGGCAGGA ATCTGTGCTG CCCCAAGAGA CCGACAACGA ACCCATGGCC
GCCCGCTATG GCACCTGGAT TTCCCCCCTC ACCGCCGAAG ATGTCTATGC CAGCTCCGAT
GAACTGATTG AACTCAGGGC CGTTGGCGAC CTGATGTATT TTTCTGAGTT TGATGGCAAA
AGTGGCAACA CAGGCATTAA GCGCCTTGAA GTCGATGGCA GCGTAACTCA GGTAGTACCA
GCCGAATTTA ATGTGGGCAG CCGGGTGCAT GAATACGGCG GTGGTGACTT TCTCGGTATA
GGTCAAAGCC TGTTTGCCAC TGGCAAGGGC GATCAGCTGT TTTACCGTTT TGCCCCCAAT
CAAGCGCCTC TGGCGCTGAC ACCCAATGGC ACCCGCCATG GGGATTGCAT TTCCTACCCC
AAGGGATCCC GCATTATTTG TGTGCGGGAA GATCACAGGC AGCAGGGCAG TCCGGCAGCC
AGTTTGGTCA CCATTAACCT GAATTTTGCC GGTGAAGGTG ACACCTTCGT CGCCGGACAC
GACTTCATCA GCTCGCCCAG TATCAACAGT GACAATACTC AGCTGGCCTG GCTCACCTGG
GAGCATCCCG CTATGCCCTG GGACAACACG CGTCTGTGGC TCGGGGAGCT TGACCGCAAG
GGGCGGCTTC ATTCGTCACG GGTAGTTGCA GGTGACGGTG GCAACGTGGC GGTTACCCAG
CCCAGCTTTG GTCCGGATGG CAGGCTGTAC TTTATTGCCG ACTATGATGA TTGGTGGAAC
CTCTATCGCC TCGGTGACGA TGGCAAACCG GAACGACTTT ATCAAAAAAA TGCCGATTTT
GCAGGCCCCG CCTGGCGTCT TGGCGAACGT ACCTATGCCT TTGAAAGTGA TAACAGCCTA
ATCGCGAGCT ATGTACATAA TGGTGAGGCC GGGCTTATCC GCCTCGATTT ACAAACTGGC
CATGCCGAAG ATATCGCCGT GGACTTTGGT GAAATCAAGC AGCTCACCGG TGGTAAGGAT
GCCGTCTATT TTATCGGCAG CAAGGTAACC ACTGAGAAAG GCATTTATAG GGTCAGTGGC
CGGGGCGTGG AGCTGGTCTA TGCGCCCAGA CTCATGGTGC TGGACCCGCG CTTTATCTCC
AGAGCCCAAA GCATCAGTTT TGCCACCGCC GACAATATGC GCGCCTGGGG CTATTTTTAT
TGGCCACGTA ATCCGGCCTT TAAAGGACTG TCTGATACCC GCCCACCGCT GTTGGTGAAG
CTGCATGGTG GCCCTACCGC CAAGGCCAAC CTGGCCTATC GCGGTGATAT CCAATATTGG
ACCAGCCGTG GCTTTGCAGT GCTGGATTTG AATTTCCGTG GCAGCAGCGG CTTTGGCCGC
GCCTACCGCC AATCCCTCTA TGGCAACTGG GGCAAGGCCG ATGTGGAGGA TGCGGTGAAC
GCCGCTCGTT TTCTGGTGAA AAAAGGCTGG GTGAATGGCG ATGAAATGGC GATTACCGGT
GCCAGCGCAG GTGGGTTAAC GGCGCTTTTG GTGCTGGCCT ATGATGACAC CTTTAAGGCC
GCCGTCAGTC GCGCCGGAAT AAGCGATATA GAGCAGCTGG CAGGCGAGAC CCATAAGTTT
GAGAAAACCT ACCTGGATCA GTTGATTGGC CCTTTGGCGA CCCACAGAAC CCTTTATCGA
GAACGTTCTC CTCTTTATCA ACTGGATCGA CTTAAAGAAC CTTTACTGCT GTTGCAGGGG
CTGCAGGATA CCGTGGTGTT ACCCAACCAG GCCCTGACCA TTTACGAGGC GCTGGAGAAA
AATCAGATCC CGGCCGCCTT GCTAACCTTT GCCGATGAGA ATCACAATCA CTGGAAAAAT
GCCAACCTGG TGAAGGCGCT CGAGTATGAG CTGGGTTTTT ACGGACAGGT GTTTGGCTTT
AAGGTTGCTG ATGAGGTGCC TTCGTTGGAC CTCCAGCTGC GCACGCCCCT CGAAGTCTCT
CAGCCACCGC TTAGCAAATA A
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| Protein sequence | MRLGIGHRVA AICLMTLALL GCEPGQESVL PQETDNEPMA ARYGTWISPL TAEDVYASSD
ELIELRAVGD LMYFSEFDGK SGNTGIKRLE VDGSVTQVVP AEFNVGSRVH EYGGGDFLGI
GQSLFATGKG DQLFYRFAPN QAPLALTPNG TRHGDCISYP KGSRIICVRE DHRQQGSPAA
SLVTINLNFA GEGDTFVAGH DFISSPSINS DNTQLAWLTW EHPAMPWDNT RLWLGELDRK
GRLHSSRVVA GDGGNVAVTQ PSFGPDGRLY FIADYDDWWN LYRLGDDGKP ERLYQKNADF
AGPAWRLGER TYAFESDNSL IASYVHNGEA GLIRLDLQTG HAEDIAVDFG EIKQLTGGKD
AVYFIGSKVT TEKGIYRVSG RGVELVYAPR LMVLDPRFIS RAQSISFATA DNMRAWGYFY
WPRNPAFKGL SDTRPPLLVK LHGGPTAKAN LAYRGDIQYW TSRGFAVLDL NFRGSSGFGR
AYRQSLYGNW GKADVEDAVN AARFLVKKGW VNGDEMAITG ASAGGLTALL VLAYDDTFKA
AVSRAGISDI EQLAGETHKF EKTYLDQLIG PLATHRTLYR ERSPLYQLDR LKEPLLLLQG
LQDTVVLPNQ ALTIYEALEK NQIPAALLTF ADENHNHWKN ANLVKALEYE LGFYGQVFGF
KVADEVPSLD LQLRTPLEVS QPPLSK
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