| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1380 |
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| Symbol | |
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| ID | 4603632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1671828 |
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| End bp | 1672733 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639780730 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_927257 |
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| Protein GI | 119774517 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0240977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAAGA TAGCGTTTAT TGGCCTTGGC AACATGGGTG GCCCAATGGC GGCCAACCTG
CTCAAGGCGG GACACAGTGT ATCGGTATTC GATCTCAACC CTGCTGCGGT TGAGTCACTC
AAGGCCCAGG GAGCAGGCCG TGGCGACACG GCCCAGGCCA TCGCCGCCGA TGCGGACTTT
GTGGTGAGCA TGCTGCCAGC CGGCAAGCAT GTACGCGGTC TCTATTTAGG CACTGATACC
GCCAAGGGGC TGATTGAGGT GGTGAAAGCA GGTTGTCTCT TGATAGACTG CTCCACCATA
GATGCCGGCA GCGCCCGCAC AGTGGCCGAC GCCGCGGCGG CAAAGGGCCT GGAATTTATT
GATGCGCCTG TGTCCGGCGG CACGGCCGGC GCCGCAGCCG GAACCCTGAC CTTTATCTGT
GGCGGCACAG ACGCGGCCTT TGAGAAGGCA CGTACCGTGC TGGCCAACAT GGGCGTGAAC
ATTTTCCATG CCGGTGGTCC GGGTGCCGGT CAGGTGGCCA AAATTTGCAA TAACATGCTT
TTGTCAGTAC TCATGGTTGG CACCAGCGAG GCATTGTCGT TGGGGATTGA CCATGGGCTC
GACCCCAAGG TGCTTTCTGA CATCATGAAG GTGTCCAGCG GCGGTAACTG GACGCTGGAA
AAGTACAATC CCTGCCCGGG TGTGATGGAA AATGTCCCAT CCTCCAAAGG CTACCAGGGC
GGCTTTATGG TCGACCTGAT GGTGAAAGAT CTGGGATTGT CGCAGGAAGC AGCCCTCGGC
AGTCAGTCCA GCACCCCCAT GGGCGCACTG GCTCGCAGCC TGTATGTGTC CCATGCCCGC
GCCGGCAATG GCACAAGGGA CTTCTCAAGT ATTTTTGAAC ATTTTGCCAA AGGCGATAAG
GCCTAA
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| Protein sequence | MAKIAFIGLG NMGGPMAANL LKAGHSVSVF DLNPAAVESL KAQGAGRGDT AQAIAADADF
VVSMLPAGKH VRGLYLGTDT AKGLIEVVKA GCLLIDCSTI DAGSARTVAD AAAAKGLEFI
DAPVSGGTAG AAAGTLTFIC GGTDAAFEKA RTVLANMGVN IFHAGGPGAG QVAKICNNML
LSVLMVGTSE ALSLGIDHGL DPKVLSDIMK VSSGGNWTLE KYNPCPGVME NVPSSKGYQG
GFMVDLMVKD LGLSQEAALG SQSSTPMGAL ARSLYVSHAR AGNGTRDFSS IFEHFAKGDK
A
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