| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1376 |
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| Symbol | |
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| ID | 4603628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1667012 |
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| End bp | 1668505 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780726 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_927253 |
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| Protein GI | 119774513 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0294673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0661505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACAC AAGTTAAGCA CTACATCGAC GGTGAGTTCA CCACAGGACA GGGTGAGCGC
ATCATTACGG TGACCAACCC GGCCAACAAC CAGCCCATCG CCGAAGTGCG CTGTGCCAGT
GACGAGGAAG TGCACGGCGC CATCGCCAGT GCCAAGGCTG CGTTCCAAAG CTGGAAAGAA
GTGCCTGTAT CCGAGCGCGC CCGGGTAATG CTGCGCTATC AGGCGCTGCT CAAAGAACAC
CACGATGAGC TGGCGACCAT TCTGGCCAAG GAAACCGGTA AAACCTTCGA AGATGCCAAG
GGTGATGTGT GGCGCGGCAT TGAAGTGGCA GAGCACGCCT GTAATATCGC TTCCCTGCTG
ATGGGCGAAA CCGTTGAAAA CGTAGCCCGT AAAATCGATA CCTATTCTTA CACTCAGCCT
CTGGGCGTGT GCGCCGGTAT TACCCCATTC AACTTCCCGG CGATGATCCC GCTGTGGATG
TTCCCCCTGG CTGTGGCCTG CGGCAACACC TTTGTACTAA AGCCCTCCGA GCAGGACCCC
ATGACGCCGC TGCGTCTGGC GGAGCTGTTT GAACAGGCCG GTGCCCCCAA GGGCGTACTG
CAACTGGTCC ACGGCGACAA GAGCGCCGTT GACATTCTGC TGACTCATCC TGACATCAAG
GCCATTTCTT TTGTGGGCTC GGTGGGCGTG GGCCAGTACG TGTACAAGAC CGGAACTGAC
AACCTCAAGC GGGTTCAGGC CTTTGCCGGC GCTAAAAACC ACTGCGTTAT TATGCCCGAC
GCCAACAAGC AGCAGGTAAT CAACAATCTG GTGGGTGCCT CTGTGGGCGC TGCCGGTCAG
CGTTGTATGG CGATTTCGGT GGCCGTATTT GTGGGCGCCG CCAAAGAGTG GATCCCTGAG
CTGAAAGAGG CTCTCGCCAA GGTACGCCCA GGTCTGTGGG ACGACAAAGA CGCCGGTTAC
GGCCCACTTA TCAGCCCAGC GGCCAAGGCC CGTGTACTCA AGCTGATTGA GCAGGGCAAG
GCTGAAGGCG CCGAGTGTTT GCTGGATGGC TCTGACTTTA CCGTGCCCGG CTATGAGTCA
GGTAACTGGG TTGGCCCGAC CATGTTCGAC AAGGTCACCA CCGACATGAG TATCTACAAG
GAAGAAATCT TTGGCCCGGT GCTGTGCTGT ATGGAAGTGG ATGAGCTGGA AGACGCCATT
GAGCTGGTGA ACAAGTCACC CTACGGCAAC GGCACCTCAA TCTTTACCGC CAGTGGCGCC
GCCGCCCGTA AATATCAGCA CGAAATTGAA GTGGGTCAGG TGGGTATTAA CGTGCCTATC
CCGGTACCGC TGCCGTTCTT CTCCTTTACC GGTTGGAAGG GCAGTTTCTA CGGCGATCAA
CACGCCTACG GCAAGCAGGC TATCCGTTTC TTCACCGAAA CCAAGACCAT CACCTGTCGC
TGGTTTGAAG ACGATATCCC CCATGGTCCC AACATGACCA TCGCCCTGCG TTAA
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| Protein sequence | MITQVKHYID GEFTTGQGER IITVTNPANN QPIAEVRCAS DEEVHGAIAS AKAAFQSWKE
VPVSERARVM LRYQALLKEH HDELATILAK ETGKTFEDAK GDVWRGIEVA EHACNIASLL
MGETVENVAR KIDTYSYTQP LGVCAGITPF NFPAMIPLWM FPLAVACGNT FVLKPSEQDP
MTPLRLAELF EQAGAPKGVL QLVHGDKSAV DILLTHPDIK AISFVGSVGV GQYVYKTGTD
NLKRVQAFAG AKNHCVIMPD ANKQQVINNL VGASVGAAGQ RCMAISVAVF VGAAKEWIPE
LKEALAKVRP GLWDDKDAGY GPLISPAAKA RVLKLIEQGK AEGAECLLDG SDFTVPGYES
GNWVGPTMFD KVTTDMSIYK EEIFGPVLCC MEVDELEDAI ELVNKSPYGN GTSIFTASGA
AARKYQHEIE VGQVGINVPI PVPLPFFSFT GWKGSFYGDQ HAYGKQAIRF FTETKTITCR
WFEDDIPHGP NMTIALR
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