Gene Sama_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1373 
Symbol 
ID4603625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1664025 
End bp1664435 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content59% 
IMG OID639780723 
Producthypothetical protein 
Protein accessionYP_927250 
Protein GI119774510 
COG category[S] Function unknown 
COG ID[COG3126] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0504546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT GGTTATTGCG TGTTGCCCTG CCGATGGCGG CATTGGTGGG GGCGGTTGGA 
CTGGGTGGAT GTGCCAGCAG TGCCGACGAC GTGGAGATCA GTGGCAGCGT TTGGTTCAGA
GAGCGTATCG CGCTGCCCCA GGATGCGGTG TTGACGGTGC AGGTGCAGGA TGTTTCCCGT
ATGGATGTGG CGGCCGAGGT GCTGGGAGAG TTCAAGGTAC CCGTCACCGC AGTGCCCAAA
GACTTTACGC TGCGCTTTAA GCCGGACACT TTTAAACAGG GCCACACCTA CGCGGTGGGC
GCACGCATCA CCCAGGGCGA TAAACTGCTG TTTATCAATA CCCAAAGCTA CAGAGTGGAT
TTCACACAGC CCACCGGCAT GTCGGTGAGG CTGGACAGTG TGGGGCGCTG A
 
Protein sequence
MKKWLLRVAL PMAALVGAVG LGGCASSADD VEISGSVWFR ERIALPQDAV LTVQVQDVSR 
MDVAAEVLGE FKVPVTAVPK DFTLRFKPDT FKQGHTYAVG ARITQGDKLL FINTQSYRVD
FTQPTGMSVR LDSVGR