| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1368 |
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| Symbol | |
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| ID | 4603620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1660050 |
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| End bp | 1660919 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780718 |
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| Product | palmitoyl-CoA hydrolase |
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| Protein accession | YP_927245 |
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| Protein GI | 119774505 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.136181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGG TATTGAACGA TCTATTGTCA CTGCTGACCC TCGAAACCCT GGAGATTGGA
CTTTATCGTG GTCAGAGCCA GGACCTGGGC TTTGGTCATG TCTTCGGCGG TCAGGTGATG
GGACAGGCTC TGAGCGCCGC CCGGGAAACC GTTGAGCCAA CCCGTAAAGT TCATTCACTT
CACAGCTATT TCTTACGGGC AGGCGATGAG TCTCTTCCCA TAGTGTACGA CGTGGAAATC
ATGCGCGACG GCGGCTCGTT CAGCGCCCGT CGGGTGAAAG CGGTGCAAAA AGGCCGCCCG
ATTTTTTACA TGACCTGCTC CTTCCAGGGA GAAGAAGAGG GATTTTCCCA TCAGATAAGT
ATGCCGGATG TGCCGGGGCC CGAAGGTCTA TTGAACCAGC AGGAGTTGGC GGTGACCCTG
AGGGACAAAA TTCCTGAAAA AATGCTGGAA AAGTTTATGG CCGATGCGCC CATCGAGATG
CGCATTGTCG ACCCTGTCAG TCCGGTGGCG CCGCGCTCCC GCGAGCCCGT GCGCCATGTT
TGGCTGCGTG CCAACGGTAA GGTGGAAGGC GACAGCCACG TGCACGATGC GCTTCTTGCC
TATGCCTCTG ATTTCAACTT TTTGGTGACA GCTGCCCAGC CGCACGGGGT GTCGTTTTTA
ACACCGGGCA TGCGGATGGC CACCATTGAC CATGCCATGT GGTTCCATCG TCCCTTGGAT
ATGAATGATT GGCTGCTATA CAGTATCGAT AGCCCCAATG CCAGCGGCGG CCGCGGTTTT
GTAAAAGGAC ATTTTTTCAA TCGCCGTGGT GAGCTGGTGG CGTCGGCTAC TCAGGAAGGA
TTGATGCGTA TGAAAAAGGA CAGCAACTGA
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| Protein sequence | MSQVLNDLLS LLTLETLEIG LYRGQSQDLG FGHVFGGQVM GQALSAARET VEPTRKVHSL
HSYFLRAGDE SLPIVYDVEI MRDGGSFSAR RVKAVQKGRP IFYMTCSFQG EEEGFSHQIS
MPDVPGPEGL LNQQELAVTL RDKIPEKMLE KFMADAPIEM RIVDPVSPVA PRSREPVRHV
WLRANGKVEG DSHVHDALLA YASDFNFLVT AAQPHGVSFL TPGMRMATID HAMWFHRPLD
MNDWLLYSID SPNASGGRGF VKGHFFNRRG ELVASATQEG LMRMKKDSN
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