| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1367 |
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| Symbol | |
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| ID | 4603619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1659088 |
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| End bp | 1659984 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639780717 |
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| Product | short chain dehydrogenase/reductase family oxidoreductase |
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| Protein accession | YP_927244 |
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| Protein GI | 119774504 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.145804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCG ATAACCAGAC TGCCCTGATC TCCGGTGCCG CATCCGGTTT GGGACGCGCC
TATGCGCTGG CACTGGCTGA GCGTGGCGCC AGCGTCATGC TGATTGATTG CTTGCCCGAA
GAGGCCGCAG AAGTACAAAG TCTGCTTAAG GCGCTCGACG TCATGGGGGC CATGTCCCGC
TATTGGTCCG TTGACGTGGG AGAACCCGAC GCCATAGAGG CCTGGGCGGC GGCATTTGAA
GCCAGCGGGG CTGGTGTGGA TTTGCTTATC AATAATGCCG GTATGCACAC CCACGGCAGC
TTTGAGCATC AGTCAATTAC CGCCATCCGT CGCCAGTTGC AGGTGGACTT GCTCGGCAGC
ATCGCCCTGA CACACGCGCT GTGGCCTGGA ATGATGAACC GGGGCTATGG CCGGGTTGTG
ATGTCCACCG GTGTCAGTGG TCTTTATGGC GATCTGCATC AAAGTGCCTT TGCCTGCAGC
AAAATGGCGC TCATAGGCCT GGTAAATGGC CTGGCCGCCG AAGGCCTGCC CCGCAATGTG
ATGGTGAACA GCCTCTGCCC CCTTGCCCAC ACCGCCATGA CAGACGCCCA TTTGGCACCA
CAGGTCAAAC CACTGTTCTC CAAGGAAATA GTGACGGCTT CCATGCTGTT TTTGCTGAGC
GCTCAGGCGC CCAGTGGGCG CCATTTGCTC GCCGGAGGCG GCAGTGTCAG TGAACTTTGC
ATTGCGGAGC ACAGGTATTG TTATTTTGAA TCTGATCTAC GCACCCCCGA AGTGATTGCC
GCCCATTGGT CCGATATCGC CAACGCCTGG CCCATCCAAA AACACGCCAA CGGTGAAGAC
CAGATCCTCG CCTTTGCCAG GCGTGCTGCC CACGAGCAGG GCATTCGACT CGACTGA
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| Protein sequence | MRFDNQTALI SGAASGLGRA YALALAERGA SVMLIDCLPE EAAEVQSLLK ALDVMGAMSR
YWSVDVGEPD AIEAWAAAFE ASGAGVDLLI NNAGMHTHGS FEHQSITAIR RQLQVDLLGS
IALTHALWPG MMNRGYGRVV MSTGVSGLYG DLHQSAFACS KMALIGLVNG LAAEGLPRNV
MVNSLCPLAH TAMTDAHLAP QVKPLFSKEI VTASMLFLLS AQAPSGRHLL AGGGSVSELC
IAEHRYCYFE SDLRTPEVIA AHWSDIANAW PIQKHANGED QILAFARRAA HEQGIRLD
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