Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1364 |
Symbol | |
ID | 4603616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1654188 |
End bp | 1656122 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639780714 |
Product | acyl-coenzyme A synthetase/AMP-(fatty) acid ligase |
Protein accession | YP_927241 |
Protein GI | 119774501 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.442954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAA TAAGCACAAG CACAAAGATG CCCGCGGATC CTGCTGAGGC GCTGCGCCAG GAAGCCAGGG ATAACCCCGA GCAATACTGG CGAAAGGCTG CCGATATGGT GGACTGGCAC AAGGCGCCAT CGACCATTCT GGATTCGTCA CAGGCGCCTT TATATCGCTG GTACACAGAC GGCGAAATCA ATACCTGCTA TAACGCCCTC GACCGTCAGG TGGATGCCGG GCGTGGCAGT CAGACGGCGT TTCATTACGT CAGTCCGGTA ACGGAAACCG AATATTCTAT CAGCTACACC GAGTGTCTGG CCCAGGTGAA GCGCCTGGCT GGCCTGCTCA AGGCACAGGG TGTGAATAAG GGTGACCGGG TAGTGATTTA CATGCCCATG GTGCCCGAGA CGGCTTATGC CATGCTCGCC TGTGCCCGTA TCGGCGCGAT TCACTCTGTG GTGTTTGGCG GTTTTGCTGC CAATGAACTG GCCAGTCGTA TCAATGATGC CAAACCAGTG ATGGTGCTTT CAGCTTCCTG TGGGGTTGAG CCTTCGGGTG TGGTGGCCTA TAAGCCGCTG CTGGATGCGG CCCTGGCTCA GGCGAGCCAT AAGGTCAGTA AATGTTTGAT CTTACAGCGC CCTCAATATG AGGCAGCGAT GACCCCCGGG CGTGATCTTG ACTGGCAAGA GTCTGTGGCC AGCGCAGCCG ATGCCGATTG GGTGCCGGTC AAGGCAACCG ACCCCCTGTA TGTGCTCTAT ACCTCTGGCA CCACCGGCCA ACCCAAGGGC GTGGTGCGGG ACAACGGCGG CCACGCAGTG GCGCTGGCGT GGTCGATGCG CTACCTCTAC GACATCGAAC CCGGTGATAC CTTCTGGGCC GCCTCAGACG TGGGCTGGGT GGTAGGACAC TCTTACATCG TGTACGGCCC TCTGATTGCC GGTGCCACCT CTGTGCTCTA TGAAGGCAAA CCCGTGGGCA CCCCGGATGC CGGTGCGTTC TGGCGCACCA TTAAAAAGTA TGGTGTAAAG AGTTTCTTTA CCGCGCCCAC TGCCATTCGC GCCATCAAGC GTGAAGACCC TGAAGGCTTT TTCTGCCGTA ACACCAACCT TGACTGCCTT AAGCAGATGT TCCTGGCCGG GGAGCGCTGC GATCCCGATA CCCTGCTGTG GGCCCAGGAA ATGCTTGGCA AGCCTGTGAT TGACCACTGG TGGCAAACTG AAACCGGTTG GCCTGTTGCC TCCAACTTGA TGGGGATTGC GCAAATGCCC ATTAAGCCGG GCTCGCCCGC CCGGCCGGTG CCCGGATATC AAGTGGATGT GGTGGACGAG GCCGGTAACA GCGTGGGCGC CGGTGAATAC GGCAACGTGG TTATTCGCCT GCCATTGCCA CCGGGCACAC TGCCGACCCT GTGGCAAAAC GACAAACGCT ACATCGACAG TTACCTCTCC ATGTACCCGG ATTGTTATCT CACCGGCGAT GCGGGTTACA TGGATGAAGA CGGCTACCTG TACATCATGA GCCGTATCGA CGATGTCATT AACGTAGCAG GCCATCGTCT GTCCACGGGC CGGTTTGAAG AGGTGCTCTG TCAGCATCCG GCAGTTGCCG AAGCGGCTGT GATTGGCGTG GAGGACAAGC TCAAAGGTCA GGTGCCCCTT GGCTTGGTGG TACTCAAGAA CGGGGTAGAC ATCACCGATG AACAGCTCAA TAAAGAGCTG GTTGCGCTGG TGCGAAGTGA AATTGGCCCC GTTGCCGCCT TTAAGCTGGT CAGTGCCATT CCCAAGTTGC CCAAGACCCG CTCAGGTAAA ATCCTGCGTG CCACCATGCG CAAGATTGCC GACAATCAGG AATACAGTGT ACCTGCCACC ATTGAAGACC CGGCTACGCT GGAACTGGTG CGCAACACCC TGACCCGCAT GGGCTATGGT GACGCCCGGG TCTGA
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Protein sequence | MTTISTSTKM PADPAEALRQ EARDNPEQYW RKAADMVDWH KAPSTILDSS QAPLYRWYTD GEINTCYNAL DRQVDAGRGS QTAFHYVSPV TETEYSISYT ECLAQVKRLA GLLKAQGVNK GDRVVIYMPM VPETAYAMLA CARIGAIHSV VFGGFAANEL ASRINDAKPV MVLSASCGVE PSGVVAYKPL LDAALAQASH KVSKCLILQR PQYEAAMTPG RDLDWQESVA SAADADWVPV KATDPLYVLY TSGTTGQPKG VVRDNGGHAV ALAWSMRYLY DIEPGDTFWA ASDVGWVVGH SYIVYGPLIA GATSVLYEGK PVGTPDAGAF WRTIKKYGVK SFFTAPTAIR AIKREDPEGF FCRNTNLDCL KQMFLAGERC DPDTLLWAQE MLGKPVIDHW WQTETGWPVA SNLMGIAQMP IKPGSPARPV PGYQVDVVDE AGNSVGAGEY GNVVIRLPLP PGTLPTLWQN DKRYIDSYLS MYPDCYLTGD AGYMDEDGYL YIMSRIDDVI NVAGHRLSTG RFEEVLCQHP AVAEAAVIGV EDKLKGQVPL GLVVLKNGVD ITDEQLNKEL VALVRSEIGP VAAFKLVSAI PKLPKTRSGK ILRATMRKIA DNQEYSVPAT IEDPATLELV RNTLTRMGYG DARV
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