| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1363 |
|---|
| Symbol | |
|---|
| ID | 4603615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 1653411 |
|---|
| End bp | 1653815 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639780713 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_927240 |
|---|
| Protein GI | 119774500 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.381305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAA CCAACAGTGC GCAAACCAGC TATTCAATCA GTGACTTGTC GAAAGAATTC
GACATTACCA CCCGCTCTAT CCGCTTCTAT GAGGATCAGG GGCTGCTCAA GCCCAAGCGT
CGTGGTCAAA CCCGTATCTA CAGCCTGAAA GACCGGGTTC GCCTTAAGCT GATTCTGCGC
GGTAAGCGCC TCGGGTTTTC CCTGGCGGAA ACCCGCCGTT TGTTTGAACT TTACGATGCC
GACAAAACCA GCGTAACCCA GCTCAATACC ATGCTGGCGC TGATTGAAGA GAAAAAAGCG
GCACTGCAAC AACAGATGGA CGATATCAAG GTGGTCTTGA TGGAACTCAC CAGCGCCGAG
GCCCAATGCC GCGGCGCCCT GGATGGCCAA TCCAGGAGTT CCTGA
|
|---|
| Protein sequence | MSSTNSAQTS YSISDLSKEF DITTRSIRFY EDQGLLKPKR RGQTRIYSLK DRVRLKLILR
GKRLGFSLAE TRRLFELYDA DKTSVTQLNT MLALIEEKKA ALQQQMDDIK VVLMELTSAE
AQCRGALDGQ SRSS
|
|---|
| |