| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1356 |
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| Symbol | |
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| ID | 4603608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1645192 |
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| End bp | 1645848 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780706 |
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| Product | 3-oxoacid CoA-transferase |
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| Protein accession | YP_927233 |
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| Protein GI | 119774493 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.684977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTTT CAAGAGAACA ACTGGCCCAG CGCGTCGCCA AAGAGCTTAA AGACGGCTAC
TACGTAAACT TAGGCATCGG CATCCCTACC TTGGTGGCCA ACTATATCCC CGACGGCATG
CAGGTGATGC TGCAGTCGGA AAATGGCCTG CTGGGCATGG GCGAATTCCC CACCGAAGAG
ACTATCGACC CGGATCTGAT TAACGCCGGT AAGCAAACCG TAACAGCGGT AAAAGGCGCA
TCGTTTTTCT CCAGCGCCGA AAGCTTCGCC ATGATCCGCG GCGGCCATGT GGACTTAACC
GTGCTCGGTG CCTTCGAGGT GGACGTTGAA GGCTCTATCG CCTCCTGGAT GATCCCCGGC
AAGCTGGTAA AAGGCATGGG CGGTGCCATG GATTTGGTGG CCGGTGCCGA CAATATTATC
GTTACCATGA TGCACGCCGA TAAATACGGT AACTCCAAGC TGCTGCCCAA GTGCGAGCTG
CCGCTCACCG GCTTTGGCTG TATCAAACGC GTGCTTACCG ATCTGGCCTT TATCGAAATC
AAAGATGGCG CCTTCCACCT GCTGGAGCGC GCCCCCGGCG TGACCGTGGA AGAAATCGTC
GAGAAGACCG CAGGCAAGCT TATCGTGCCC GAGCACGTAC CTGAGATGCA GTTCTAA
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| Protein sequence | MALSREQLAQ RVAKELKDGY YVNLGIGIPT LVANYIPDGM QVMLQSENGL LGMGEFPTEE
TIDPDLINAG KQTVTAVKGA SFFSSAESFA MIRGGHVDLT VLGAFEVDVE GSIASWMIPG
KLVKGMGGAM DLVAGADNII VTMMHADKYG NSKLLPKCEL PLTGFGCIKR VLTDLAFIEI
KDGAFHLLER APGVTVEEIV EKTAGKLIVP EHVPEMQF
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