| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1342 |
|---|
| Symbol | |
|---|
| ID | 4603594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 1634681 |
|---|
| End bp | 1635196 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639780692 |
|---|
| Product | phosphinothricin N-acetyltransferase, putative |
|---|
| Protein accession | YP_927219 |
|---|
| Protein GI | 119774479 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.952982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.763441 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAGAC ATGCCGCTCT ACACGATGCC AGCGCCGTTG CCGACATCTA CAACCATTAC
ATCGAAAGCA CCGCCATCAC CTTTGAAGAA ACACCCCTTC AGGCAGCAGA GATAGCAGCT
CGAATTCAGC ATGTGCAAGC AGCTGGCCTG CCCTGGCTGG TTGCCTTGGA GGGCAACGCC
CTTACCGGCT ATGCCTATGC GACCAAATGG AAAGAGCGAA GTGCTTACCG GTTCACAGTT
GAAACCACGG TTTATGTTGC TCCCAACGGA CATGGGAAAG GTGTCGGTAC GGCTTTGTAT
CAGGCACTTA TCGAGCGGCT GAAAATCCTG AAAGTAAACA GCGTGATTGG CGGCATTACC
CTGCCAAATC CGGCCAGCAT TGCCCTACAC GAAAAAATGG GCATGAAAAA AGTCGCACAT
TTTCAAAATA TTGGCTACAA GTTTGGCCAA TGGCAAGACG TTGGTTACTG GCAGCTTAAC
TTGCAGACAG TGCCAGGTCT GGACTCATCG CCCTGA
|
|---|
| Protein sequence | MIRHAALHDA SAVADIYNHY IESTAITFEE TPLQAAEIAA RIQHVQAAGL PWLVALEGNA
LTGYAYATKW KERSAYRFTV ETTVYVAPNG HGKGVGTALY QALIERLKIL KVNSVIGGIT
LPNPASIALH EKMGMKKVAH FQNIGYKFGQ WQDVGYWQLN LQTVPGLDSS P
|
|---|
| |