Gene Sama_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1328 
Symbol 
ID4603580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1617762 
End bp1618037 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content57% 
IMG OID639780678 
Productacylphosphatase 
Protein accessionYP_927205 
Protein GI119774465 
COG category[C] Energy production and conversion 
COG ID[COG1254] Acylphosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.161573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.572666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGTG TGCTGATTCG GGTCAAGGGC AAGGTGCAGG GCGTGTGTTT CAGGCGGTTT 
GCCCTGGAGC GGGCGAGGGA GCTGGGGGTT ACGGGGTATG TGACCAATAT GGATGATGGC
TCAGTGCAAA TTCTGGCCCA GGGAAGTGCG CCCTTGGTGG AGAAACTCAT TGATTGGTGC
TGGGAGGGTT CACCCGCCGC CAGCGTCAAT GCGGTGGAAG TCAATGAAGA CGAGGCAGAT
GAAATCTACC TCGACTTTTC AATCACTCAG TCCTGA
 
Protein sequence
MRRVLIRVKG KVQGVCFRRF ALERARELGV TGYVTNMDDG SVQILAQGSA PLVEKLIDWC 
WEGSPAASVN AVEVNEDEAD EIYLDFSITQ S