Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1321 |
Symbol | |
ID | 4603573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1607496 |
End bp | 1608830 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639780671 |
Product | succinylarginine dihydrolase |
Protein accession | YP_927198 |
Protein GI | 119774458 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3724] Succinylarginine dihydrolase |
TIGRFAM ID | [TIGR03241] succinylarginine dihydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0233544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.210198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACT TTGAAGCAAA CTTTGATGGA CTGGTTGGCC CTACCCACAA TTATGCCGGT CTGTCTTTTG GTAATGTCGC CTCCCAAAGC AATGCCGCCC AAGTTTCAAA CCCCAAAGAC GCTGCCAAGC AAGGCCTGAA AAAAGCCAAG GCATTAGCCG ATATGGGCAT GGTGCAAGGT ATGTTGGCCC CACAGGAGCG CCCGGATATT CATACACTGC GCAGAGTGGG ATTCACGGGC TCTGACGCCG ATGTGCTCTC TCAGGCAGCA AAGGCCTCAC CTGTGCTGCT GCAAGCCTGC GCCAGCGCGT CCAGTATGTG GACCGCCAAC GCGGCGACAG TTTCTCCGAG TGCTGACAGT GACGATGGAA AGCTCCATTT CACACCAGCA AACCTGGTAG ACAAACTGCA TCGCAGCATT GAGCCTGTCA CCACAGGTAA TATATTGAAA GCCATTTTTA CCGATGAGCG GTATTTTGCT CATCACCAAC ATCTACCCGA GCACCCACAT TTTGGTGATG AAGGCGCTGC CAACCATACC CGCCTGTGTC ATGATTATGG CCAGGCTGGC GTTGAAGTCT TTGTCTATGG TCGCAGCGTT GCCGACCTAT CCCGTCCGGC GCCAGTAAAA TATCCAGCCA GGCAAACGCT GGAAGCCTCG CAGGCCGTTG CCAGATTGCA TCAGCTCAGT GATGATCGCA CCGTCTACAT GCAGCAGAAT CCCGATGTTA TCGACCAGGG CGTCTTTCAC AACGATGTGA TTGCAGTGGG TAACCAAAAT GTGCTCTTTT ACCATGAGCA GGCTTTTTTG GAGACCCAGG CGAAACTCGC TGAAATCGAT AAAAAAATGC ATGGCAACAT GTATTTTATC GAAGTTCCCA CTGCCAAGGT GAGTGTACAG GATGCAGTAA AGAGCTATCT CTTCAACACG CAGATAATTA CCCTGAGTGA CGGTAACATG GCTATCATAG CCCCTACCGA TTGCCAGGAA AATCCAGCAG TCCATGCTTA TCTTAATGAG CTGGTCACTC TGAATACGCC CATTAAGGCG GTACATTATT TTGATGTGAA GCAAAGCATG CAAAATGGCG GTGGTCCTGC ATGCCTGCGC CTGCGGGTAG CCATGAATGA GACCGAACTG GCGGCAGTGA ACCCACAGGT AATGATGAAC GATGCGCTCT TTGCCCGTCT GAATCAGTGG GTCGATAAAC ATTATCGCGA CCGTCTGAGT ACTCAGGATT TGGCTGACCC GCAGCTATTG ATGGAATCAC GGACTGCACT GGATGAGCTG ACGCAAATCA TGAAACTTGG CAGCGTGTAT CAATTCCAAC GTTAA
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Protein sequence | MKHFEANFDG LVGPTHNYAG LSFGNVASQS NAAQVSNPKD AAKQGLKKAK ALADMGMVQG MLAPQERPDI HTLRRVGFTG SDADVLSQAA KASPVLLQAC ASASSMWTAN AATVSPSADS DDGKLHFTPA NLVDKLHRSI EPVTTGNILK AIFTDERYFA HHQHLPEHPH FGDEGAANHT RLCHDYGQAG VEVFVYGRSV ADLSRPAPVK YPARQTLEAS QAVARLHQLS DDRTVYMQQN PDVIDQGVFH NDVIAVGNQN VLFYHEQAFL ETQAKLAEID KKMHGNMYFI EVPTAKVSVQ DAVKSYLFNT QIITLSDGNM AIIAPTDCQE NPAVHAYLNE LVTLNTPIKA VHYFDVKQSM QNGGGPACLR LRVAMNETEL AAVNPQVMMN DALFARLNQW VDKHYRDRLS TQDLADPQLL MESRTALDEL TQIMKLGSVY QFQR
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