Gene Sama_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1321 
Symbol 
ID4603573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1607496 
End bp1608830 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content51% 
IMG OID639780671 
Productsuccinylarginine dihydrolase 
Protein accessionYP_927198 
Protein GI119774458 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3724] Succinylarginine dihydrolase 
TIGRFAM ID[TIGR03241] succinylarginine dihydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0233544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.210198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACT TTGAAGCAAA CTTTGATGGA CTGGTTGGCC CTACCCACAA TTATGCCGGT 
CTGTCTTTTG GTAATGTCGC CTCCCAAAGC AATGCCGCCC AAGTTTCAAA CCCCAAAGAC
GCTGCCAAGC AAGGCCTGAA AAAAGCCAAG GCATTAGCCG ATATGGGCAT GGTGCAAGGT
ATGTTGGCCC CACAGGAGCG CCCGGATATT CATACACTGC GCAGAGTGGG ATTCACGGGC
TCTGACGCCG ATGTGCTCTC TCAGGCAGCA AAGGCCTCAC CTGTGCTGCT GCAAGCCTGC
GCCAGCGCGT CCAGTATGTG GACCGCCAAC GCGGCGACAG TTTCTCCGAG TGCTGACAGT
GACGATGGAA AGCTCCATTT CACACCAGCA AACCTGGTAG ACAAACTGCA TCGCAGCATT
GAGCCTGTCA CCACAGGTAA TATATTGAAA GCCATTTTTA CCGATGAGCG GTATTTTGCT
CATCACCAAC ATCTACCCGA GCACCCACAT TTTGGTGATG AAGGCGCTGC CAACCATACC
CGCCTGTGTC ATGATTATGG CCAGGCTGGC GTTGAAGTCT TTGTCTATGG TCGCAGCGTT
GCCGACCTAT CCCGTCCGGC GCCAGTAAAA TATCCAGCCA GGCAAACGCT GGAAGCCTCG
CAGGCCGTTG CCAGATTGCA TCAGCTCAGT GATGATCGCA CCGTCTACAT GCAGCAGAAT
CCCGATGTTA TCGACCAGGG CGTCTTTCAC AACGATGTGA TTGCAGTGGG TAACCAAAAT
GTGCTCTTTT ACCATGAGCA GGCTTTTTTG GAGACCCAGG CGAAACTCGC TGAAATCGAT
AAAAAAATGC ATGGCAACAT GTATTTTATC GAAGTTCCCA CTGCCAAGGT GAGTGTACAG
GATGCAGTAA AGAGCTATCT CTTCAACACG CAGATAATTA CCCTGAGTGA CGGTAACATG
GCTATCATAG CCCCTACCGA TTGCCAGGAA AATCCAGCAG TCCATGCTTA TCTTAATGAG
CTGGTCACTC TGAATACGCC CATTAAGGCG GTACATTATT TTGATGTGAA GCAAAGCATG
CAAAATGGCG GTGGTCCTGC ATGCCTGCGC CTGCGGGTAG CCATGAATGA GACCGAACTG
GCGGCAGTGA ACCCACAGGT AATGATGAAC GATGCGCTCT TTGCCCGTCT GAATCAGTGG
GTCGATAAAC ATTATCGCGA CCGTCTGAGT ACTCAGGATT TGGCTGACCC GCAGCTATTG
ATGGAATCAC GGACTGCACT GGATGAGCTG ACGCAAATCA TGAAACTTGG CAGCGTGTAT
CAATTCCAAC GTTAA
 
Protein sequence
MKHFEANFDG LVGPTHNYAG LSFGNVASQS NAAQVSNPKD AAKQGLKKAK ALADMGMVQG 
MLAPQERPDI HTLRRVGFTG SDADVLSQAA KASPVLLQAC ASASSMWTAN AATVSPSADS
DDGKLHFTPA NLVDKLHRSI EPVTTGNILK AIFTDERYFA HHQHLPEHPH FGDEGAANHT
RLCHDYGQAG VEVFVYGRSV ADLSRPAPVK YPARQTLEAS QAVARLHQLS DDRTVYMQQN
PDVIDQGVFH NDVIAVGNQN VLFYHEQAFL ETQAKLAEID KKMHGNMYFI EVPTAKVSVQ
DAVKSYLFNT QIITLSDGNM AIIAPTDCQE NPAVHAYLNE LVTLNTPIKA VHYFDVKQSM
QNGGGPACLR LRVAMNETEL AAVNPQVMMN DALFARLNQW VDKHYRDRLS TQDLADPQLL
MESRTALDEL TQIMKLGSVY QFQR