| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1314 |
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| Symbol | |
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| ID | 4603566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1598135 |
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| End bp | 1599010 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780664 |
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| Product | putative thioredoxin-like protein |
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| Protein accession | YP_927191 |
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| Protein GI | 119774451 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0231071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.110772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAG GGATACCTCA ACAGGAAAGT GCTGCCATGG CTGGCGTGGC GCTGACCCGG
GACAATATCC AGTCCGTGCT GGAACAATCG CTCGAAGCGC CCATCGTCTT GAGTTTTTTC
GCGCCGTCAC ACCCAGACAG CGTGGCGATG AATACTCGCC TGGCGCAGGT GATAAAGGGT
CGCGGTGTGC TGGCGACAGT GAACTGTGAA ACAGAGATGG AAATCGCATC CTATTTTCGC
ATTCAGGCGT TGCCAACTGT GCTGGTGATA AGCCAGGGCC AACCGGTCGA CGGTTTTGCC
GGCGATAAAA CCGATGCAGA GCTTGATGCC ATGCTGTCTC AGCACCTGCC TCAGGCCTGG
AAGCAAGTAT TGCTGCAGGC GAAGCAAACA CTGGCCGATG GACAAGGTGC GGATGCCTTG
GCGCTTCTTA AGAGCATCGA AATGGATGCT GCAGCCATAG GCGCCGAGTG GACGCTGCTG
ATGGCAGAGG CGGAAATTGC ACAGGGCGAG CTCAGTAGCG CTGAGCTGCG TTTGGCCGCT
GTGGGTCTTG CCGATCAGGA CGCCCATTAC CACAGCCTCA AGGCAAAACT CGCGCTGGCC
AGAGAGGCGG CGGATACCCC AGAGGTTAGG GAGCTGCAAA GCCGGTTCGC CAATGAATCC
GACAATCAGG CGCTGCGGAT TGAGCTTGCC AGGGCGTTGG CACAGGCCAA GCGTGAAGAA
GAAGCGCTGG AGCTGCTCTT TGACGTGCTT CAACGGGATC TCGGCGCTGA AGGCGGTGAA
GTAAAACAAG CGTTTATGGG TATTTTAACG GCCATGGGGC AGGGCAGCAG TATCGCCAAT
GGCTTCAGAC GCAAACTTTA CAGCCTGCTT TACTGA
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| Protein sequence | MTQGIPQQES AAMAGVALTR DNIQSVLEQS LEAPIVLSFF APSHPDSVAM NTRLAQVIKG
RGVLATVNCE TEMEIASYFR IQALPTVLVI SQGQPVDGFA GDKTDAELDA MLSQHLPQAW
KQVLLQAKQT LADGQGADAL ALLKSIEMDA AAIGAEWTLL MAEAEIAQGE LSSAELRLAA
VGLADQDAHY HSLKAKLALA REAADTPEVR ELQSRFANES DNQALRIELA RALAQAKREE
EALELLFDVL QRDLGAEGGE VKQAFMGILT AMGQGSSIAN GFRRKLYSLL Y
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