| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1310 |
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| Symbol | |
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| ID | 4603562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1592157 |
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| End bp | 1594886 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780660 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_927187 |
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| Protein GI | 119774447 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.216995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0673614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTATC AGGTGTTGGC CAGAAAATGG CGCCCTGCCA ATTTTGCCGA AGTAGTGGGC
CAATCCCACG TGCTTCATGC CTTGACCAAT GCCCTCGGTC AGCAAAGATT ACACCATGCT
TACCTCTTTA CCGGCACCCG TGGTGTGGGA AAGACCAGTT TGGCCAGGCT GTTCGCCAAG
GGGCTCAATT GTGAGCAGGG AATTACTGCC ACGCCCTGCG GGCAATGCAG TGCCTGTCGC
GAGATTGCCG AAGGCCGCTT TGTTGACCTT ATTGAAGTGG ACGCCGCATC CCGTACCAAG
GTGGATGACA CCCGCGAAAT CCTCGACAAC GTGCAGTATC GACCCAGTCG CGGACGTTTT
AAGGTGTACC TCATCGATGA AGTGCACATG CTTTCCAAAA GCTCTTTCAA CGCGCTGCTG
AAGACCCTCG AAGAGCCGCC TGAGCATGTG AAGTTCCTGC TCGCCACCAC AGATCCGCAA
AAGCTGCCGG TGACAGTGCT GTCCCGGTGT TTGCAATTCA ATCTCAAAGC GCTGACACAA
CCGCAAATTC AGGCGCAATT GGCTGCCGTT CTCAGTGGCG AGGGTTTGGG ATTCGATGAG
GATGCTTTAT CGCTGCTTGC CAAGGCGGCG GCCGGCAGTA TGCGTGATGC CCTGAGTCTT
ACCGACCAGG CGATTGCCTT TGGCGGGGGA GAGGTGCGCC TTGCTCAGGT GCAAACCATG
CTCGGGGCCA TAGATAAAGG CCAAATACTG AACTTATTCG ATGCCCTCTG CCAGGGCGAC
ATTGAGACAC TGCTCACCAC TGCCCGTACA GCAATGGGTT TCGGTGCCGA TGCCGACGAG
GTCTTAAGGG CCTTGCTTGA ACTGCTTCAT CAAATCAGCC TCGCACAATT TGCCCCGGCC
ACTGCCAGCA TCAGCGACAA CGGGGCTGCC GTACTTGCCT GGGCCCAAGC ATTGAAGCCC
GAGCAGGTAC AGCTTTATTA CCAAATTTTG CTCAGTGGCC GTAAGGATTT GCCCTACGCG
CCCGACCCAG CCTCCGGGCT GGAAATGAGT CTGCTTCGCG CCGTGGGCTT TGTGCCCGAA
AAGCCGGTAA GCCGTTGGCA GTCAGGTGAG GGCGTGTCGG CTGCCGAGGC ACTCAAGCTT
GTTGCGCCAT CGACAGAGGG AAAGAGTGCG CCTCAAGCGG ACACTGCGCC TAACCACGCT
GTTGTTACTG AAACGCCTGT GGCGGCTGCA GTGCCGCAAG CCGGTATTGC TTCCACCTTG
GTGGCAGGTA CCCACAGCCC TGTCAGGACG ACTGAGGAGC CCGCTGTTAA GGCCGACAGT
TCGGTTGCCA CCGAAGAGGC ACCAAGCGGC GATGACGATG TGCATGAGGC TGAGTCTGAC
GCCCTGTTTG CAGAGCAAAA CCTGCTGATT TCCCAGGCCG AAAGCCAGGG GTTCAATCCC
GGATACGACG CAGTTAACGC CGGTGACAAC GACCTCCCGT TACATGATGC CCCACCATTA
TTCGATGAAA TGGCGTATGC GGACTATCCC CAAAGCTATT CGGCCGATAT CTCTGAGACT
CCAGTGGAAC GGGGGCTTGA CGATGGCGCT GGTTTTCAGC TCCAAAACGA ACAGTCCCAA
AGCGATCATC TTCAAAGCGG TGCTACGGGG GCTCAGTCAA AGGTCGTGGC AGAGTCCCAA
CCTGTCAACA CGCCGGCTTC TGCATTTGGT GATGACTTGC TCGATGCTGT TTTGGCTGCC
AGAGAAGATT TACTCAGTGG TATCACCTCG GAGGCGAAAG AAGATGAGGC AAAAAAGCCG
GTATCCAGTT TCGAGCGCCG CCGCATGGCG GTGCAGGAAA CTAGCACTGT TCCGGTAACC
ACGGCGCCGA CTGACAAGGG CACGCAGGAT GAAATATCCC TCGGTGCAAT GTCAGCCAAT
ACCCAAACAG CTACGCTCAC CCAAGCCACA GCAAGTGTAT CGGGTGCGGA TGTTGCTGCC
GATTATGACA GGCCGCCTTG GGAAGATACG GCCACTCCTG ATGACAGTTC AAAAGCGCCT
GAATTGGCCC TGGATTACGC AGTAAACAGA GAGTCAGCTC CGGTTAACGC TGAGTCGCCA
GACAAGGCTC ATCCAGAGGA ATACACATCG GCTGCGCCAC ATACGCAGAC ACCCCAACCT
CTAAAAGCTG AATCTCAAAC AGCGTTGCAG GCTAAAGGGC AAACACACAC GGACGAAGTC
TCGTCCAGTG ACGGGGTGCA TTGTGCCAAT CACAGCGCCG CCAGCCCTAT TGGCGGTGAT
GAAACTGACC TTCGCTGGTA CAAGCTGATG GGAGCGTTGG AGATTGGCGG CCGGGTTCGC
CAGCTGGCGG TCAATTCGGT TTGTCTGGCA TGGTCTAATC CTATCCCCCT GGTGCTGAAA
CAGGACCAAA AGCATCTGGC AGCGCCCGTG GCCATTGGGC AGCTCAATGA GGCGCTGTCC
AAAGCCCTCG GTCATGAGGC TGAAATCGCA CTGGAGGTGG GTGAGGTCCC GGGGCGGGAA
ACCCCGCTGG ATATCCGTGC CCGTTTTCAC CGGGAGCTGC TGAGCGATGC CAGAGGGGCG
CTCAATACCG ATCCCGCAGT GCTGAGACTG ATGCAGCAGG CAGGCGCCTG GTTTGATGAC
GACAGTATAA GCTATCCGCC CGATCTGCTT GCCCAGCGGG GCAGAGCCTT GCCAACACCA
CCGGCTTTGG CTCAGGAGCC TGTGGTCTGA
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| Protein sequence | MSYQVLARKW RPANFAEVVG QSHVLHALTN ALGQQRLHHA YLFTGTRGVG KTSLARLFAK
GLNCEQGITA TPCGQCSACR EIAEGRFVDL IEVDAASRTK VDDTREILDN VQYRPSRGRF
KVYLIDEVHM LSKSSFNALL KTLEEPPEHV KFLLATTDPQ KLPVTVLSRC LQFNLKALTQ
PQIQAQLAAV LSGEGLGFDE DALSLLAKAA AGSMRDALSL TDQAIAFGGG EVRLAQVQTM
LGAIDKGQIL NLFDALCQGD IETLLTTART AMGFGADADE VLRALLELLH QISLAQFAPA
TASISDNGAA VLAWAQALKP EQVQLYYQIL LSGRKDLPYA PDPASGLEMS LLRAVGFVPE
KPVSRWQSGE GVSAAEALKL VAPSTEGKSA PQADTAPNHA VVTETPVAAA VPQAGIASTL
VAGTHSPVRT TEEPAVKADS SVATEEAPSG DDDVHEAESD ALFAEQNLLI SQAESQGFNP
GYDAVNAGDN DLPLHDAPPL FDEMAYADYP QSYSADISET PVERGLDDGA GFQLQNEQSQ
SDHLQSGATG AQSKVVAESQ PVNTPASAFG DDLLDAVLAA REDLLSGITS EAKEDEAKKP
VSSFERRRMA VQETSTVPVT TAPTDKGTQD EISLGAMSAN TQTATLTQAT ASVSGADVAA
DYDRPPWEDT ATPDDSSKAP ELALDYAVNR ESAPVNAESP DKAHPEEYTS AAPHTQTPQP
LKAESQTALQ AKGQTHTDEV SSSDGVHCAN HSAASPIGGD ETDLRWYKLM GALEIGGRVR
QLAVNSVCLA WSNPIPLVLK QDQKHLAAPV AIGQLNEALS KALGHEAEIA LEVGEVPGRE
TPLDIRARFH RELLSDARGA LNTDPAVLRL MQQAGAWFDD DSISYPPDLL AQRGRALPTP
PALAQEPVV
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