Gene Sama_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1309 
Symbol 
ID4603561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1591486 
End bp1592031 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content53% 
IMG OID639780659 
Productadenine phosphoribosyltransferase 
Protein accessionYP_927186 
Protein GI119774446 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID[TIGR01090] adenine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.107555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0516553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAG ATAGCTTAGC GCTTATCAAG CAAAGCATTA AAACCATTCC TGATTACCCC 
AAAGCCGGCA TTATGTTCCG TGATGTGACA AGCCTGCTTG AGGATCACAC TGCTTACCAA
ACAGCTATGA AGCTGCTCGT TGAACGCTAC AAGGATTCCG GCTTCACTAA GGTCGTGGGA
ACCGAATCCC GCGGTTTCCT GTTCGGTGCA CCGCTTGCGT TGGAGCTGGG TGTGGGTTTT
GTGCCTGTAC GCAAGCCTGG CAAACTGCCC CGTGAAACCA TCAGCGAAAG CTATGAGCTG
GAATACGGAC ACGACACCCT GGAAATCCAC GTCGATGCTA TCAAGGCTGG TGACAAGGTG
TTGGTGATAG ACGATCTGCT GGCCACCGGC GGTACTATCG AAGCCACGGT TAAACTCATT
CGCCGTCTGG GCGGTGATGT GGCCCACGCG GCCTTTGTTA TTTCCCTGCC GGATCTGGGT
GGTGAAAAAC GGTTGCAGGC CATGGGCCTG GAAATCTGTA AATTGTGTGA GTTCGAAGGC
GATTAA
 
Protein sequence
MNTDSLALIK QSIKTIPDYP KAGIMFRDVT SLLEDHTAYQ TAMKLLVERY KDSGFTKVVG 
TESRGFLFGA PLALELGVGF VPVRKPGKLP RETISESYEL EYGHDTLEIH VDAIKAGDKV
LVIDDLLATG GTIEATVKLI RRLGGDVAHA AFVISLPDLG GEKRLQAMGL EICKLCEFEG
D