Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1309 |
Symbol | |
ID | 4603561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1591486 |
End bp | 1592031 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639780659 |
Product | adenine phosphoribosyltransferase |
Protein accession | YP_927186 |
Protein GI | 119774446 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins |
TIGRFAM ID | [TIGR01090] adenine phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.107555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0516553 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAG ATAGCTTAGC GCTTATCAAG CAAAGCATTA AAACCATTCC TGATTACCCC AAAGCCGGCA TTATGTTCCG TGATGTGACA AGCCTGCTTG AGGATCACAC TGCTTACCAA ACAGCTATGA AGCTGCTCGT TGAACGCTAC AAGGATTCCG GCTTCACTAA GGTCGTGGGA ACCGAATCCC GCGGTTTCCT GTTCGGTGCA CCGCTTGCGT TGGAGCTGGG TGTGGGTTTT GTGCCTGTAC GCAAGCCTGG CAAACTGCCC CGTGAAACCA TCAGCGAAAG CTATGAGCTG GAATACGGAC ACGACACCCT GGAAATCCAC GTCGATGCTA TCAAGGCTGG TGACAAGGTG TTGGTGATAG ACGATCTGCT GGCCACCGGC GGTACTATCG AAGCCACGGT TAAACTCATT CGCCGTCTGG GCGGTGATGT GGCCCACGCG GCCTTTGTTA TTTCCCTGCC GGATCTGGGT GGTGAAAAAC GGTTGCAGGC CATGGGCCTG GAAATCTGTA AATTGTGTGA GTTCGAAGGC GATTAA
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Protein sequence | MNTDSLALIK QSIKTIPDYP KAGIMFRDVT SLLEDHTAYQ TAMKLLVERY KDSGFTKVVG TESRGFLFGA PLALELGVGF VPVRKPGKLP RETISESYEL EYGHDTLEIH VDAIKAGDKV LVIDDLLATG GTIEATVKLI RRLGGDVAHA AFVISLPDLG GEKRLQAMGL EICKLCEFEG D
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