Gene Sama_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1308 
Symbol 
ID4603560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1590950 
End bp1591321 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content53% 
IMG OID639780658 
Producthypothetical protein 
Protein accessionYP_927185 
Protein GI119774445 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.060954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0507678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAAAGC GCAGTGTGTT GCTGGTGATT GGTTTGATAA GCCTGGTGAT GGGTGTAGCA 
GGCGTGTTTT TACCGCTGCT GCCCACGGTG CCCTTTGTGC TGTTGGCTGC CTTTTGTTTT
GCCCGCTCCA GTGAGCGTTT GCACCGCTGG TTAATGACGC ATCCCTGGTT TGCCGATGCT
CTCAATAACT GGGATCAAAA AAAGGCCATC AGACGGGGGC TCAAACGTAA AGCCATGGTG
CTGTCGAGCC TGAGTTTTGC TATCAGCATT GCCGTCGTGC CGCTGCTGTG GGTCAAGCTG
ATGCTGTTTT CGTTACTGGT GGCTCTGCTG GCTTTCCTGC ACTCAGTGCC CGAACTTGAA
GATACACCCT GA
 
Protein sequence
MIKRSVLLVI GLISLVMGVA GVFLPLLPTV PFVLLAAFCF ARSSERLHRW LMTHPWFADA 
LNNWDQKKAI RRGLKRKAMV LSSLSFAISI AVVPLLWVKL MLFSLLVALL AFLHSVPELE
DTP