Gene Sama_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1298 
Symbol 
ID4603550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1584324 
End bp1584659 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content53% 
IMG OID639780648 
Productferredoxin, 2Fe-2S 
Protein accessionYP_927175 
Protein GI119774435 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID[TIGR02007] ferredoxin, 2Fe-2S type, ISC system 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.579463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0110849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAA TCGTATTTTT GCCTCACGAA GAACTCTGTC CTGATGGTGC CGTGGTTGAG 
GCCAAGGTGG GTGAGTCCAT ATTGGATGTG GCCTTAAGAA ACGGGATCCA CATTGAACAT
GCCTGTGAAA AATCCTGTGC CTGCACCACC TGCCACGTGG TGGTACGTGA AGGCTTTGAT
GAGCTCGAGC CATCGGACGA ACTGGAAGAT GATATGCTCG ACAAAGCCTG GGGACTGGAG
CCGGAAAGCC GCCTCTCTTG TCAGGCCAAG GTTGTGGATT GTGACCTGGT GGTCGACATT
CCCAAGTACA CCATCAACAT GGTCAGTGAA GGCTAA
 
Protein sequence
MPQIVFLPHE ELCPDGAVVE AKVGESILDV ALRNGIHIEH ACEKSCACTT CHVVVREGFD 
ELEPSDELED DMLDKAWGLE PESRLSCQAK VVDCDLVVDI PKYTINMVSE G