Gene Sama_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1295 
Symbol 
ID4603547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1581544 
End bp1581867 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content51% 
IMG OID639780645 
ProductHesB/YadR/YfhF family protein 
Protein accessionYP_927172 
Protein GI119774432 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.609132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0124228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTT CTATGACACC CGCAGCCAAT GAGCGAGTCA AAGCCTTCCT TGCCAATCGC 
GGTAAGGGTG TAGGCCTTCG TCTCGGTCTC AAGACGTCTG GCTGCTCGGG TATGGCCTAC
GTGCTGGAAT TTGTTGACGA TCTCAACGAT GACGACGAAG TCTACGAAAT AGACGGTGTT
AATATCATCA TCGATGCCAA GAGCTTCATT TACCTGCAGG GTATCGAGCT CGATTTCGTC
AAGGAAGGCC TCAATGAGGG CTTCAAATTC AATAACCCCA ATGCCAAGGG AGAATGCGGC
TGCGGCGAGA GCTTCACCGT ATAA
 
Protein sequence
MAISMTPAAN ERVKAFLANR GKGVGLRLGL KTSGCSGMAY VLEFVDDLND DDEVYEIDGV 
NIIIDAKSFI YLQGIELDFV KEGLNEGFKF NNPNAKGECG CGESFTV