| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1294 |
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| Symbol | |
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| ID | 4603546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1581148 |
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| End bp | 1581531 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639780644 |
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| Product | scaffold protein |
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| Protein accession | YP_927171 |
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| Protein GI | 119774431 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
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| TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.691863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0125117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATACA GTGAAAAAGT GATAGATCAT TACGAGAATC CCCGTAACGT GGGTTCTTTT
GACAAGAACG ATCCCAGCGT AGTGACCGGT ATGGTGGGTG CGCCTGCCTG CGGTGACGTG
ATGAAACTTC AGTTGAAGAT CAACGACGCC GGCATCATTG AAGACGCCAA ATTCAAAACC
TACGGCTGTG GCAGCGCCAT TGCTTCAAGC TCTTTGGTCA CCGAGTGGGT GAAAGGCAAG
AGCATCGAAG AAGCAGCTGC TATTAAGAAC ACGGATATCG CCGAAGAGCT GGCTCTGCCA
CCGGTGAAGA TCCACTGTTC TATTCTGGCC GAAGATGCCA TTAAGGCAGC TCTGGAAGAG
TACAAGCACA AGCAAGCCAA GTAA
|
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| Protein sequence | MAYSEKVIDH YENPRNVGSF DKNDPSVVTG MVGAPACGDV MKLQLKINDA GIIEDAKFKT
YGCGSAIASS SLVTEWVKGK SIEEAAAIKN TDIAEELALP PVKIHCSILA EDAIKAALEE
YKHKQAK
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