| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1288 |
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| Symbol | |
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| ID | 4603540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1575337 |
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| End bp | 1576506 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780638 |
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| Product | hypothetical protein |
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| Protein accession | YP_927165 |
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| Protein GI | 119774425 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3213] Uncharacterized protein involved in response to NO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0467877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.017488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAATA TCCATGATCC CCGCAAGACC GAATCCATCC CGCCACTGCT CAGACTGGGC
TTTCGTCCGT TCTTTTTATT TGGCGCCGCC CTCAGCGTCC TGGGCGTTGT CCTTTGGGTA
TTGGCACTAT CCGGCGCCAT TAACTTCCAA CCCCATGGAG GCGCTTACTG GTGGCACGGT
CATGAGATGC TTTTTGGCTT TGTAACGGCC ATCATCGCCG GCTTTTTACT CACAGCTGTC
CAGAATTGGA CCGGAGTGCC CGGGCTTGGC GGCAATAAGC TGCTGGCCCT GGTATTGCTG
TGGCTTGCCC CCAGGCTCAC ACTTCCCATC ACCTCAGTTC CGTTCGAGCT GGTGATGGTA
ATGGACCTCA CTTTTTTACC CGCTGTTGCC CTTGCATTGG GCCACAGTGT CACCAAGGTA
AAACAATGGC GTAATCTGGT GTTTGTGCCC ATGCTGCTGT TGATGGCAAG CCTCAACGCC
CTCTCCTACC TTGCTTTGAC CGACGGCAAC GCGATACAGG CCCAAAAGGC GCTGCACGGA
GCCGCGTTGG TGGTAATCAT GATAGTGGCG CTCCTCGGTG GCCGGGTTAT CCCCTTTTTC
ACTGAACGCG CCAGCGCCTA TCAGCGCAAG ACGAATCTTT GGTATCTCGA TGCCGGAACC
TTTGTCTCGC TGTTGATGCT GATTGGGGCG CTGATTTTTG ATCTGACCGC ACTGCAACGC
CCAATCGCCG CTGTAGCAGC CATCATTATT TTGCTTCGCT GGCATCGCTG GGGCTGGCGC
CACACCCTGG GTGTCCCGCT GCTTTGGTCT TTGCATTTAA GCTACCTGTG CATTCCGGTC
GGGCTCGGGA TCATTGCCAT GGGTCTGCCC TTTTCTGCAG GGTTTCATGC GCTGGCCGCC
GGGGGCATGG GTGGCATGAT TCTGGCAATG ATGGCACGGG TTTCTCTGGG CCATACCGGC
CGGATGCTTG AGCCCCCCAA AGCCATGGTG GCCGGTTTTG TGTTGGTACT GCTTGCCGTT
GTACTCAGGG TGATGGCCGG GCTAATTCCT GCTGCATATC TGCCGCTGCT TATCGCCTCT
GCAGTCACAT GGGGGCTGGC GTTTGGTATT TTTATCCTCA AATACGGCCC AATGCTGGCC
TCCCCCAGAG CTGATGGCCG TCCGGGTTAG
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| Protein sequence | MLNIHDPRKT ESIPPLLRLG FRPFFLFGAA LSVLGVVLWV LALSGAINFQ PHGGAYWWHG
HEMLFGFVTA IIAGFLLTAV QNWTGVPGLG GNKLLALVLL WLAPRLTLPI TSVPFELVMV
MDLTFLPAVA LALGHSVTKV KQWRNLVFVP MLLLMASLNA LSYLALTDGN AIQAQKALHG
AALVVIMIVA LLGGRVIPFF TERASAYQRK TNLWYLDAGT FVSLLMLIGA LIFDLTALQR
PIAAVAAIII LLRWHRWGWR HTLGVPLLWS LHLSYLCIPV GLGIIAMGLP FSAGFHALAA
GGMGGMILAM MARVSLGHTG RMLEPPKAMV AGFVLVLLAV VLRVMAGLIP AAYLPLLIAS
AVTWGLAFGI FILKYGPMLA SPRADGRPG
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