| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1285 |
|---|
| Symbol | |
|---|
| ID | 4603537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 1573654 |
|---|
| End bp | 1574322 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639780635 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_927162 |
|---|
| Protein GI | 119774422 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.016663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTGC TGGTTGGTGG TGAAAAAGGC GGTAGTGGCA AGAGTTGCCT GGCGCAGAAT
ATTGCAGTGC ATATCACCCA AAAATTCAAT GCCAACGTGC TCATGGTGGA CTGTGACCCC
CAGCGAACAA CCTCTGATTG GATCCAGGCC CGAAACAACG ATCCCAGCCT GCCGCAAATC
AATTGCATCC AGTTATACGG TAAAATCCGT AACGATCTCT TGAGCCTGAA TGAACGTTTC
GACTATGTGA TTGTGGACTG TGGTGGTCAG GATAACCTCG CCATGCGTGC CGCCATGTCG
GTGGCAACTT ACGTTGTTGT GCCACTGAGG CCAAAACGGC GTGACCTCAA AACACTGCCG
CACATGGAAG ACATGCTCAG TACCTGTAAG ATGGTTAACC CCAAGATGGT CGCAACTGTC
GTGCTGACTC AGTGCCCTGC TTTGCCCACT CAGGCCAAAC GCATCATTGA AGCAAAGGAA
GTTGTTACAT CCTTTGGTTT GAGAGTGCTG GACTCTGTCA CCTTCAGCCG CAACATCTAT
GATGACAGTG AGGAAAAAGG ATCCTCGGTC ATCGAAATCG AGCCCGACGG CAAAGCCGCC
GAAGAAATTC GTGCCATTGC CGATGAACTC TTGGCCATAC CACCAGAAAA TTCCTATGAG
CTTAACTGA
|
|---|
| Protein sequence | MILLVGGEKG GSGKSCLAQN IAVHITQKFN ANVLMVDCDP QRTTSDWIQA RNNDPSLPQI
NCIQLYGKIR NDLLSLNERF DYVIVDCGGQ DNLAMRAAMS VATYVVVPLR PKRRDLKTLP
HMEDMLSTCK MVNPKMVATV VLTQCPALPT QAKRIIEAKE VVTSFGLRVL DSVTFSRNIY
DDSEEKGSSV IEIEPDGKAA EEIRAIADEL LAIPPENSYE LN
|
|---|
| |