| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1267 |
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| Symbol | |
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| ID | 4603519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1553022 |
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| End bp | 1554167 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780617 |
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| Product | exonuclease SbcD, putative |
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| Protein accession | YP_927144 |
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| Protein GI | 119774404 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0520829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000185211 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGATTCA TCCATACCTC AGACTGGCAT CTGGGCCGCA CACTGCACAA TCAGTCGTTA
CTGGACGAGC AGGCGCAGAT GCTGGAGACC CTGCTGACAC TCATCGAGAC CCACGAGGTG
GATGCACTCG TGATAGCAGG CGATATCTTC GACCGCTCCG TGCCACCGGC CGCCGCAGTG
AGTCTTCTGG ATGATTTTCT CGATAAGGTT GTCCAGCAGC TCAAGGTGAG CGTCATTGCT
ATCGGCGGTA ATCACGATGG CCAGGAGCGA TTGGCCTTTG GAGCAAGGCA AATGGCCGGT
GCCGGCCTTT ATATTCAGGG GCCGGTCAGG GCCAGTATTG AACCCGTCCA CATTGATGGG
AAGCAAGGCG CTGCATTTTT CTACCCCATC CCTTATGCGG AGCCTGCGCT CGTTCGCCAT
CTGCTGAATG ATGAGGATAT TCACAGCCAT CAGGATGCCA TGGCGGCCTT GCTGGCAAAG
GTTACGGCCC ACAACAGTGA CGGGCTGCCC AAGATAGTCA TAAGTCACTG CTTTTTAGAC
GGTGGCAACG AGTCTGATTC AGAGCGCCCC CTGTCAATCG GCGGCGCCGA CAAGATTTCA
CCGGCGCTGT TCGCACCATT CGATTACGCT GCCCTTGGGC ATCTGCATGG CCCACAATAT
AAGGGCGCAG AGCATGTGCG CTACAGCGGC TCTCCCTTGA AATACTCCTT CAGCGAGCAG
CACCAAAATA AGTCGGTCAC CCTGGTGAAT ATATTGCCCG GCCAGGCACC GGATATCCGT
TTGCTGCCCA TCAAACCCCA GCGCGATGTG CGCATTATCG AAGGCTATCT GGATGCGCTC
CTTACACGGG GAGCAAGCGA CCCCGGCCGG GATGATTACC TGATGGTGCG ATTGCTCGAT
ACCCATGCCA TTTTAGAACC CATGGCAAAG CTTCGGGCAA TCTACCCGAA TGTGCTGCAC
CTTGAACGTA CCGGGCTGAT GCAGGAAAGG GCACTGGAGG GGCCTGGCCG AGAGCGCATG
CAAAAAAGCG AACTGACCAT GTTTGAAGAT TTCTTTACTC AGGTTCAGGG GGAACCCCTT
TCCGGGCCAC AAAAAACATT GATGTCCGAA TTGATTGCCT CCTTGCACAG GGAGGGCGGT
CAATGA
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| Protein sequence | MRFIHTSDWH LGRTLHNQSL LDEQAQMLET LLTLIETHEV DALVIAGDIF DRSVPPAAAV
SLLDDFLDKV VQQLKVSVIA IGGNHDGQER LAFGARQMAG AGLYIQGPVR ASIEPVHIDG
KQGAAFFYPI PYAEPALVRH LLNDEDIHSH QDAMAALLAK VTAHNSDGLP KIVISHCFLD
GGNESDSERP LSIGGADKIS PALFAPFDYA ALGHLHGPQY KGAEHVRYSG SPLKYSFSEQ
HQNKSVTLVN ILPGQAPDIR LLPIKPQRDV RIIEGYLDAL LTRGASDPGR DDYLMVRLLD
THAILEPMAK LRAIYPNVLH LERTGLMQER ALEGPGRERM QKSELTMFED FFTQVQGEPL
SGPQKTLMSE LIASLHREGG Q
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