Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1263 |
Symbol | |
ID | 4603515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1550643 |
End bp | 1551185 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780613 |
Product | acetyltransferase |
Protein accession | YP_927140 |
Protein GI | 119774400 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000173592 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCATATTG AGCTCTTTAC CGACCGCCTG AAACTCAGTA CCCTCGTCCC CAACGACAAG GCCAATTTTG TGGCCATGCA AACCGATGTT GGTGTAAACC GATATGTGCG GGTGTGTGAG AGCCTGCCCC AGGTGGAAGC TAAGTTTGAA GCCCGCTTGG TGCCCTGGGA GTTCGAGAGC GGCGAATGGC TCACCCTGGT GATTGAAACC CTTGAAGGCG ACTTTGTTGG CTACACAGGA TTTCATCAGG ACTGCGCACT GTCTCGGCGC GCCGAAGTGG GCTATATGCT GAGTCCGGCG ATGTCCGGCA GGGGTTTTGC CACCGAGGCT ACCCGTGCCG TGATCGATTG GGGCGCTCAT CTTTTTGATA TACATAAGTT TGTCGCCTGG TGCAGTGAGC AAAACCTCGG TTCTCGCGCC GTGCTTGAGC GACTTGGATT TCAGCTTGAA GGTGTGCTCA AAAGCCACAG CCTTATCGGG GATGAATGGC ACAACGACTG TGTTTATGGC CTGCTGGCCG ATGAGCGGGG CGATGTAAAT TAA
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Protein sequence | MHIELFTDRL KLSTLVPNDK ANFVAMQTDV GVNRYVRVCE SLPQVEAKFE ARLVPWEFES GEWLTLVIET LEGDFVGYTG FHQDCALSRR AEVGYMLSPA MSGRGFATEA TRAVIDWGAH LFDIHKFVAW CSEQNLGSRA VLERLGFQLE GVLKSHSLIG DEWHNDCVYG LLADERGDVN
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