Gene Sama_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1263 
Symbol 
ID4603515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1550643 
End bp1551185 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content55% 
IMG OID639780613 
Productacetyltransferase 
Protein accessionYP_927140 
Protein GI119774400 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000173592 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCATATTG AGCTCTTTAC CGACCGCCTG AAACTCAGTA CCCTCGTCCC CAACGACAAG 
GCCAATTTTG TGGCCATGCA AACCGATGTT GGTGTAAACC GATATGTGCG GGTGTGTGAG
AGCCTGCCCC AGGTGGAAGC TAAGTTTGAA GCCCGCTTGG TGCCCTGGGA GTTCGAGAGC
GGCGAATGGC TCACCCTGGT GATTGAAACC CTTGAAGGCG ACTTTGTTGG CTACACAGGA
TTTCATCAGG ACTGCGCACT GTCTCGGCGC GCCGAAGTGG GCTATATGCT GAGTCCGGCG
ATGTCCGGCA GGGGTTTTGC CACCGAGGCT ACCCGTGCCG TGATCGATTG GGGCGCTCAT
CTTTTTGATA TACATAAGTT TGTCGCCTGG TGCAGTGAGC AAAACCTCGG TTCTCGCGCC
GTGCTTGAGC GACTTGGATT TCAGCTTGAA GGTGTGCTCA AAAGCCACAG CCTTATCGGG
GATGAATGGC ACAACGACTG TGTTTATGGC CTGCTGGCCG ATGAGCGGGG CGATGTAAAT
TAA
 
Protein sequence
MHIELFTDRL KLSTLVPNDK ANFVAMQTDV GVNRYVRVCE SLPQVEAKFE ARLVPWEFES 
GEWLTLVIET LEGDFVGYTG FHQDCALSRR AEVGYMLSPA MSGRGFATEA TRAVIDWGAH
LFDIHKFVAW CSEQNLGSRA VLERLGFQLE GVLKSHSLIG DEWHNDCVYG LLADERGDVN