Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1262 |
Symbol | |
ID | 4603514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1550238 |
End bp | 1550516 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639780612 |
Product | peptidyl-prolyl cis-trans isomerase C |
Protein accession | YP_927139 |
Protein GI | 119774399 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0001567 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTCGTG CAACCGCCAG ACATCTTCTG GTTAGCTCGC AAGAACAATG CGAAGTACTG AAAAAGCTCA TCGAAGGTGG TGCCGATTTT GCCGACATCG CCAGAGAGCA TTCTGCCTGT CCTTCAGGGA GCCAGGGTGG CGAGTTGGGC TCTTTTGGGC CGGGGATGAT GGTGCGGGAA TTTGATGAAG TGGTGTTTTC TGCCCCGCTG CATGTGGTGC AGGGGCCGGT AAAAACCCAG TTCGGCTATC ACCTGTTGGA AGTGACCAGC CGGGGATGA
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Protein sequence | MVRATARHLL VSSQEQCEVL KKLIEGGADF ADIAREHSAC PSGSQGGELG SFGPGMMVRE FDEVVFSAPL HVVQGPVKTQ FGYHLLEVTS RG
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