| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1245 |
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| Symbol | |
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| ID | 4603497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1528416 |
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| End bp | 1529333 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780595 |
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| Product | histone deacetylase/AcuC/AphA family protein |
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| Protein accession | YP_927122 |
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| Protein GI | 119774382 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000118499 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCCTC TGGTCTATCA CACCAGCTAT TCCAAGCTGG TGTTGCCCCC AAAGCATCAG
TTCCCCATCA CCAAGTACGC CCATCTCCGG CAGCATTTGC TGGAGTATGG GCATGCTTTG
GAAGCGCAAT TTGTCTCACC TGACCCGGTA GACGCGACCT TTATTAAAGG CGTTCACGAC
TCAGATTACG TAGATGCCTT TCTCAATGGC ACTCTGTCAC CGCAAGCCAT TCGCAGGTTG
GGATTTCCCT TGAGCCACGC TCTGGTCGAA CGCACCCTGC ATTCTTTGGG CGGGTCACTG
CTCACGGCCA AGCTTGCCAT GAGTCGGGGT ATTGCGCTGC ATCTTGCAGG TGGCTACCAC
CATGCTCACC GGGATTTTGG CAGCGGATAT TGTGTGTTTA ACGATCTGGT ATTGGCGGCA
AGGCACCTGA TCGACGAGGG CCATGCAAGC CGTGTGATGA TCCTTGACTG TGACGTACAT
CAGGGTGATG GCACCGCCAC CCTGTGCGCA GACATGGACG ATATCATCAG TGTATCTGTG
CACTGCGATA GTAATTTTCC CAGTCGCAAG CCCGCGTCCG ACTATGATGT TCCGCTGCCA
AAAGGGTTGG AGGACGACGA CTATCTCGAT GCATTGGAGC AAGTATTCCA ATACCTTCTG
CATCTGGAAA AGCCGGATGT CATTCTCTAT GATGCTGGAG TCGATGTTCA TCATGATGAC
AGGCTGGGGC ACCTTAATAT CAGTACCCAA GGTCTGCTTC GCAGAGACAA ATTGGTTATC
ACCATGGCGA GGAACGCCGG GTTGCCATTG GCTGCTGTGA TTGGCGGCGG ATACTCTGCA
AATCCACTAC ACTTGAGCGA AAGACACAGC CAATTATTTA TTGCCGCCAA TCAGGTATGG
CAAGGGGATA ATGAATAA
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| Protein sequence | MIPLVYHTSY SKLVLPPKHQ FPITKYAHLR QHLLEYGHAL EAQFVSPDPV DATFIKGVHD
SDYVDAFLNG TLSPQAIRRL GFPLSHALVE RTLHSLGGSL LTAKLAMSRG IALHLAGGYH
HAHRDFGSGY CVFNDLVLAA RHLIDEGHAS RVMILDCDVH QGDGTATLCA DMDDIISVSV
HCDSNFPSRK PASDYDVPLP KGLEDDDYLD ALEQVFQYLL HLEKPDVILY DAGVDVHHDD
RLGHLNISTQ GLLRRDKLVI TMARNAGLPL AAVIGGGYSA NPLHLSERHS QLFIAANQVW
QGDNE
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