| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1238 |
|---|
| Symbol | pspB |
|---|
| ID | 4603490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 1522917 |
|---|
| End bp | 1523156 |
|---|
| Gene Length | 240 bp |
|---|
| Protein Length | 79 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639780588 |
|---|
| Product | phage shock protein B |
|---|
| Protein accession | YP_927115 |
|---|
| Protein GI | 119774375 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02976] phage shock protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0677488 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATGG ATGTATTGAT GGCGCCCATT ATTATTTTCA TGGTGATAGT GGCACCCATA
TGGCTGGTTC TGCATTACCG CAGCAAGCGG CAGGTGAGCC AGGGACTTAC CGACGAAGAG
TTCAAACAGC TTCACGAACT CATCGCCCTG GCTGACAAGA TGGATCAGCG TATCGAGACT
CTGGAAGCCA TTCTGGACGC CGAGTCTCCT GAGTGGAGGA ACAAGCATGA GCACGCGTGA
|
|---|
| Protein sequence | MDMDVLMAPI IIFMVIVAPI WLVLHYRSKR QVSQGLTDEE FKQLHELIAL ADKMDQRIET
LEAILDAESP EWRNKHEHA
|
|---|
| |