| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1237 |
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| Symbol | |
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| ID | 4603489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1522209 |
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| End bp | 1522892 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639780587 |
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| Product | phage shock protein A |
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| Protein accession | YP_927114 |
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| Protein GI | 119774374 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0721434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTATTT TCTCTCGTTT CGCGGACATC ATTAACTCCA ACATCAGTGC CTTGCTGGAC
AAGGCAGAAG ATCCGGAAAA AATGGTTCGC CTTATCATTC AGGAAATGGA AGACACCCTG
GTGGAAGTGC GCTCTACCTC AGCCAAGGTG CTGGCCGAAA AGAAAGACAT CCTTCGCCGC
ATCGCCCGAG TTGATGCTCA GGTTCAGGAT TGGGAAGAGA AAGCCGAGCT GGCCATCTCC
AAAGAGCGTG AAGATCTGGC CCGTGCTGCC CTGGTAGAAA AGCAAAAAGC CTCTACCCTG
GCCGATACTC TGCAGCGCGA GCTCGAAGTG GTCGAAGATC ATATCCTGCG CCTGAAAGAA
GAAGTAACTC AGCTTCAGGA AAAACTGGCC GATGCCAAGG CACGCCAGAA GACCATCATC
ATGCGCAAGC AGACTGCTTC CAGCCGTCTT GAGGTAAAAA AGCAGCTGGA TTCCAGTAAA
ATAGACAATG CCATGCTGAA GTTCGAGCAG TATGAACAAC GTGTCGAGAG CCTGGAAGCT
CAGGTGGAGT CATACGATCT GGCCAACAAA TCCAGTCTGA ACGACGAGTT TGCCGCTCTG
CAGGCCGAAG ATTCAGTGAA TGCCGAGCTG GAAGCCCTGA AGGCGAAAAT GAAGGGCAAG
ACCAAAGAAA AAGCTGGCAA GTAA
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| Protein sequence | MGIFSRFADI INSNISALLD KAEDPEKMVR LIIQEMEDTL VEVRSTSAKV LAEKKDILRR
IARVDAQVQD WEEKAELAIS KEREDLARAA LVEKQKASTL ADTLQRELEV VEDHILRLKE
EVTQLQEKLA DAKARQKTII MRKQTASSRL EVKKQLDSSK IDNAMLKFEQ YEQRVESLEA
QVESYDLANK SSLNDEFAAL QAEDSVNAEL EALKAKMKGK TKEKAGK
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