| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1234 |
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| Symbol | |
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| ID | 4603486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1518230 |
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| End bp | 1519261 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780584 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | YP_927111 |
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| Protein GI | 119774371 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.736823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATTT ACCTTATCCG CAGACTGAAC CTCTTTATCG CGACCTCCAT ATTGATGGTG
AGCATTCTGT TTCTGGCAAC CAGCCAGTTT CCAACGGACA GGGTGTATGC CCTGACAGGC
ATCGACAATC CCTCCGGCGA ACAGGCGCTG CAGATTATCG AAGATTATCA GTTGGATAAA
TCGGAGTTCC GCCAATATAT CGCCTATGTT CAGCAGCGGC TTACCGGCAA CCTGGGCATT
TCCACCACCT CTCAACAAAG TGTGGCAAAA GAGCTGGCCA CTGTGCTGCC GACATCTTTT
GAGCTGGCGT GTTTTTCAGG CTTGCTGGCG CTGCTCCTTG GGATCCCACT CGGGGTTTTG
GCCTCCCTTA ACCAACATAA ATTGACTCAA CATGCCATCA TGGCCATTAC CCTCACCGGC
TACTCCGTGC CTGTGTTCTG GCTTGGCTTA TCCTTGTCGC TGTGGTTTGG CGTGCGTCTG
GGATGGCTAC CCATCTCAGG CCAGATTAAC CTGCTTTACG AAATCAAACC CGTCACTGGC
TTTATGCTGA TAGACACCCT GCTGTCAGAT TCAAGCTACC GTATTTCAGC ATTCAAGGAT
GCGCTGGCGC ACATTGTCTT GCCGGCAGTC ACTCTGGCGG TATTGCCCTT TACCGTGGTG
GTGCGTATTA CCCGCGCTGC CATGGTCAAC GTGATGAATC AAACCTATAT CCGTGCCGCC
GAGGCACGTG GGCTGCACAC GGGCATGATC ATCCTGAAAC ATGCGCTCCC CAATGCCCTC
ATCCCGGTGC TGAAACACCT AGGCCTGATG CTCGGAGCAT TCGCCAGTTA TGCCATTGTG
GTGGAAGTTA TTTTCTCCTG GCCCGGAGTG GGCTCCTGGC TGGTGTCAGG TATCTATCAG
CGTGATTACA CCGTCATTCA GGGCGGAATT CTGGCGGTTG CCCTGCTCAT TATTTTCCTG
AGCATCCTGA TTGAAGTGAT ACACACAGCC TCCAACCCGC TGAGCAGGAA AGAACTTTAT
GCCTCAAATT AA
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| Protein sequence | MGIYLIRRLN LFIATSILMV SILFLATSQF PTDRVYALTG IDNPSGEQAL QIIEDYQLDK
SEFRQYIAYV QQRLTGNLGI STTSQQSVAK ELATVLPTSF ELACFSGLLA LLLGIPLGVL
ASLNQHKLTQ HAIMAITLTG YSVPVFWLGL SLSLWFGVRL GWLPISGQIN LLYEIKPVTG
FMLIDTLLSD SSYRISAFKD ALAHIVLPAV TLAVLPFTVV VRITRAAMVN VMNQTYIRAA
EARGLHTGMI ILKHALPNAL IPVLKHLGLM LGAFASYAIV VEVIFSWPGV GSWLVSGIYQ
RDYTVIQGGI LAVALLIIFL SILIEVIHTA SNPLSRKELY ASN
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