Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1229 |
Symbol | |
ID | 4603481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1513527 |
End bp | 1514183 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639780579 |
Product | putative uracil-DNA glycosylase |
Protein accession | YP_927106 |
Protein GI | 119774366 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACTGGC AACAACTTCT TGGAGACGAA AAACGCTCTG CGTACTTCCA GGACACCCTT AAGTACATCA ATGAGCGCAT ACGCGCCGGA GTGACCGTCT ATCCGGCCAA GGCCGATATC TTCAATGCGT TTCGATTTAC TCCTCTGGAG CAGGTTAAGG TGGTGATATT GGGGCAAGAT CCTTACCACG GCCCCAATCA GGCACACGGT CTGTGCTTTT CAGTAAAATC CCCCTGTCCA CCCCCTCCCT CTCTGCAGAA CATCTTTATC GAGCTCACCA ATTCAATCCC GGGCTTTATT GCCCCTTCCC ATGGGGACTT AACTCCTTGG GCAACTCAAG GCGTGTTGCT ACTCAATACT ATATTGACAG TGGAGCGCGG ACAGGCACAT TCCCACGCCC ACCTGGGCTG GGAGCGGTTT ACCGATGCAG TAATACGTGG CATCAGTACC CATTGTCACG GGGTGATATT TTTGCTTTGG GGCAGCCATG CCGGCAAAAA AGCGGGCTTG ATTGACGGCA GCAGACACAG AGTACTGCAA GCGCCGCACC CGTCACCGTT CTCTGCACAC AAAGGCTTTT TTGGTTGCAA TCACTTTGCC ATTGCCAATG ACATGCTGAG ACATCAGGGC AAATCTCCCA TAGAGTGGCA ACTCTGA
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Protein sequence | MDWQQLLGDE KRSAYFQDTL KYINERIRAG VTVYPAKADI FNAFRFTPLE QVKVVILGQD PYHGPNQAHG LCFSVKSPCP PPPSLQNIFI ELTNSIPGFI APSHGDLTPW ATQGVLLLNT ILTVERGQAH SHAHLGWERF TDAVIRGIST HCHGVIFLLW GSHAGKKAGL IDGSRHRVLQ APHPSPFSAH KGFFGCNHFA IANDMLRHQG KSPIEWQL
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