Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1226 |
Symbol | |
ID | 4603478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1508471 |
End bp | 1510828 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639780576 |
Product | endopeptidase La |
Protein accession | YP_927103 |
Protein GI | 119774363 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000223975 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAG AGCGTGAAGC GCATTTCGAA TTGCCGGTAT TACCCCTGCG AGATGTGGTG GTGTACCCCC ATATGGTCAT TCCGTTATTT GTGGGTCGTG AAAAGTCTAT TCGCTGCCTG GAAACGGCCA TGGCCCAAGA TAAGCAGATC ATGCTTGTCG CTCAGCGAGA TGCCGATCTG GATGAGCCCG GTGCTGACGA CATTTTTGAG GTGGGGACCA TCGCCTCCAT TCTGCAGCTG CTCAAACTGC CTGACGGCAC AGTTAAAGTG CTGGTTGAGG GGGGGCGCCG TGCCCGCGTT GCCCGTTACA CCCAGGAAGA GCCTTTCTTC ATCGGCCGCA TCGAAGAGCT GCCTTCGGCG CCGTTGGAAG ACAAGGAAGA AGAGGTGTTG GTGCGCAGTG CCATCGCCCA GTTTGAAGGC TACATCAAGC TCAATAAAAA AATTCCACCC GAAGTGCTCA CCTCCATGTC CGGCATCGAC GAGGCTGCTC GCCTTGCCGA TACCATGGCG GCCCATATGC CACTCAAGCT CGAAGACAAA CAGTCTGTGC TTGAAATGGT GAATGTGGGT GAGCGCCTCG AGTACCTGAT GGCCATGATG GAAGGCGAAA TCGATTTGTT GCAGGTGGAG AAGCGCATCC GCTCCCGCGT GAAAAAGCAA ATGGAAAAGA GCCAACGCGA GTACTACCTG AATGAGCAAA TGAAAGCCAT TCAGAAGGAG CTTGGCGATC TTGATGAAGG CCATGATGAA TTTGAGACTC TCAATCGTAA GATTGAAGAG GCCAAGATGC CGGCTGACGC CAAAGACAAG GCCCAGGCTG AGCTGAACAA GTTACGTATG ATGTCTCCCA TGTCAGCAGA GGCCACTGTG GTGCGCTCCT ATGTTGATTG GATGACTTCA GTGCCTTGGT TTGAGCGCTC CAAAATCAAG CGTGACCTCT CCAAGGCCGA GCAGGTACTT AATGCAGACC ACTATGGTCT GGAAAAAGTC AAAGAGCGTA TCCTTGAGTA TTTGGCGGTT CAGACCCGGG TGAAACAGCT TAAAGGCCCA ATCCTGTGTC TGGTAGGCCC ACCAGGTGTG GGTAAAACCT CGCTCGGTCA GTCAATTGCC AAGGCAACCG GCCGTAAATA TGTGCGGGTG GCGCTCGGTG GTGTGCGCGA TGAAGCGGAA ATCCGCGGCC ATCGCCGTAC TTACATCGGC TCTATGCCGG GCAAAATCAT TCAGAAGATG GCCAAGGTTG GGGTGAAAAA CCCGCTGTTC CTGTTGGATG AAATCGACAA GATGAGTTCC GACATGCGCG GCGACCCGGC TTCAGCCCTG CTGGAAGTTT TGGACCCAGA GCAGAACGCC ACCTTTAACG ATCACTATCT GGAAGTCGAT TATGACCTGT CCGATGTGAT GTTTGTGGCC ACCAGTAACT CCATGGATAT TCCAGGCCCG CTGTTGGACC GTATGGAAGT GATTCGTCTG TCGGGTTACA CCGAAGACGA AAAGCTCAAC ATCGCCAAGC AGCACTTACT GCCAAAGCAG GTAGAGCGCA ACGGCCTTAA GCCACAGGAA ATCAGCGTCG ATGATGGTGC AATTCTCGGC ATTATCCGTT ACTACACCCG TGAGGCAGGC GTCCGTGCCC TTGAGCGTGA GCTGTCGAAG ATTTGCCGTA AAGTCGTGAA GCAAATACTG CTGGATAAAG CGGTGAAACA CGTGGATGTG ACAGGTGAAA ACCTTAAATC ATTCCTGGGT GTCCAGCGTC ATGACTATGG TAAGGCTGAG TCCAACAATC AGGTAGGTCA GGTAACAGGT CTTGCCTGGA CTCAGGTTGG CGGCGATCTC CTGACCATTG AAGCCACTTC CGTGGCGGGT AAGGGCAAGC TGACATACAC GGGCTCTCTG GGTGATGTGA TGCAGGAGTC GATTCAGGCC GCGATGACAG TGGTTCGGGC GCGCGCCGAG CAGCTGGGTA TCAACCCTGA CTTCTATGAA AAGCGCGATA TCCATGTGCA CGTGCCTGAA GGTGCGACGC CAAAGGATGG TCCATCAGCC GGTGCCGCCA TGTGTACCGC ACTGGTTTCA ACCTTAACGG GTAATCCTGT TCGCGCTGAC GTGGCCATGA CAGGTGAGAT TACTTTGCGC GGTGAAGTGC TGCCCATCGG TGGTCTCAAG GAGAAACTGC TGGCGGCTCA CCGTGGTGGC ATCAAGCATG TGCTTATCCC CAAGGAAAAC GAACGTGACC TTGAAGAAAT CCCCGCTAAC GTGGTGGCAG ATCTGCAAAT TCACCCGGTT CGTTGGGTGG ACGAAGTGCT GAAATTGGCG CTGGAGCGCC CGGTTGAAGG CTTCGAAGTG GTCAAAAACG CCGGATAA
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Protein sequence | MSQEREAHFE LPVLPLRDVV VYPHMVIPLF VGREKSIRCL ETAMAQDKQI MLVAQRDADL DEPGADDIFE VGTIASILQL LKLPDGTVKV LVEGGRRARV ARYTQEEPFF IGRIEELPSA PLEDKEEEVL VRSAIAQFEG YIKLNKKIPP EVLTSMSGID EAARLADTMA AHMPLKLEDK QSVLEMVNVG ERLEYLMAMM EGEIDLLQVE KRIRSRVKKQ MEKSQREYYL NEQMKAIQKE LGDLDEGHDE FETLNRKIEE AKMPADAKDK AQAELNKLRM MSPMSAEATV VRSYVDWMTS VPWFERSKIK RDLSKAEQVL NADHYGLEKV KERILEYLAV QTRVKQLKGP ILCLVGPPGV GKTSLGQSIA KATGRKYVRV ALGGVRDEAE IRGHRRTYIG SMPGKIIQKM AKVGVKNPLF LLDEIDKMSS DMRGDPASAL LEVLDPEQNA TFNDHYLEVD YDLSDVMFVA TSNSMDIPGP LLDRMEVIRL SGYTEDEKLN IAKQHLLPKQ VERNGLKPQE ISVDDGAILG IIRYYTREAG VRALERELSK ICRKVVKQIL LDKAVKHVDV TGENLKSFLG VQRHDYGKAE SNNQVGQVTG LAWTQVGGDL LTIEATSVAG KGKLTYTGSL GDVMQESIQA AMTVVRARAE QLGINPDFYE KRDIHVHVPE GATPKDGPSA GAAMCTALVS TLTGNPVRAD VAMTGEITLR GEVLPIGGLK EKLLAAHRGG IKHVLIPKEN ERDLEEIPAN VVADLQIHPV RWVDEVLKLA LERPVEGFEV VKNAG
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