| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1224 |
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| Symbol | clpP |
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| ID | 4603476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1506371 |
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| End bp | 1506979 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639780574 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_927101 |
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| Protein GI | 119774361 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000403497 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATAACG CACCGGAATC AGTATTCAAT GCGCTCGTGC CCATGGTGGT GGAACAAACC
GCAAAAGGTG AGCGTTCCTA CGATATCTAT TCACGTCTGC TGAAAGAGCG AGTCATCTTC
CTGGTGGGGC AGGTTGAAGA GCACATGGCT AACCTGATTG TTGCGCAGCT ACTGTTTCTG
GAATCCGAAA ACCCAGATAA AGAGATTTAT CTCTACATCA ACTCACCGGG TGGCAGCGTG
ACTGCGGGTA TGGCAATTTA CGATACTATG CAGTTCATTA AGCCCAAGGT CAGCACCGTT
TGTATCGGTC AGGCCTGCAG TATGGGCGCT TTCCTGCTTG CCGGTGGTGA AAAAGGCATG
CGCCATTGTT TGCCCAATTC CAGGGTAATG ATCCACCAGC CTTTAGGTGG TTTCCAGGGA
CAGGCATCGG ATATCGCTAT CCATGCGCAG GAAATTTTGG GTATCAAACA CAAACTCAAC
CAGATGTTAT CGCACCACAC AGGGCAGCCA ATGGAAGTGA TTGAGCGTGA CACTGACCGC
GATAATTTCA TGAGTGCAAC CCAGGCCGTT GAGTACGGTC TGATCGATTC AGTGCTGACC
AGTCGCTGA
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| Protein sequence | MHNAPESVFN ALVPMVVEQT AKGERSYDIY SRLLKERVIF LVGQVEEHMA NLIVAQLLFL
ESENPDKEIY LYINSPGGSV TAGMAIYDTM QFIKPKVSTV CIGQACSMGA FLLAGGEKGM
RHCLPNSRVM IHQPLGGFQG QASDIAIHAQ EILGIKHKLN QMLSHHTGQP MEVIERDTDR
DNFMSATQAV EYGLIDSVLT SR
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