| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1223 |
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| Symbol | tig |
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| ID | 4605949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1504977 |
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| End bp | 1506281 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780573 |
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| Product | trigger factor |
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| Protein accession | YP_927100 |
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| Protein GI | 119774360 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000148222 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTTT CTGTTGAAAC AACTCAAGGC TTAGAGCGTC GCCTGACCAT CTCTGTACCT
GCCGAGCAGA TCGAAAAACT GGTTAACGAG AGCCTGAAGC GCGAAGCCAA GCGTGCCCGT
ATCCCTGGTT TCCGTCCTGG TAAAGTACCT ATGAGCGTTG TCAGCAAGCG CTACGGCGCC
GCTATCCGTC AGGACGTGAC TGGCGAAATC ATGCAGCGCA ATTTTGTTGA AGCCATCATC
GCCGAGAAGC TGAATCCAGC TGGCGCACCT ACTTTCATGC CAGGTGCAAG CGATGCCGAC
AAGTTTGAAT TTGTTGCCAC TTTTGAAGTG TATCCAGAAG TAGAACTCAA AGGTCTGGAT
GCTATCGAAG TTGAACAGCC AAAAGCTGAT GTGACCGATG CTGACGTAGA CAGCATGATC
GAAACCCTGC GCAAGCAACA TGCTACCTTC GACGCCGCCC CGCGCGCTGC TGAAGAAGGC
GACAAAGTCG TTATCAACTT TGTTGGCAGC GTAGACGGAG AAGAGTTCCA GGGTGGCAAG
GCCGAAGGCT TTGAGCTGCA ACTGGGCAGC GGTCGTATGA TCCCTGGCTT CGAAGAAGGC
ATCAAAGGCC ACAAGGCCGG TGAAGAATTC GAAATCGACG TGACCTTCCC TGAGGAATAC
CACGCTGAAA ACCTGAAGGG CAAAGCGGCC AAGTTCGCTA TCACCCTGAC TGAGGTGAAA
GCGGCTAACC TGCCAGAAGT AAACGACGAG TTTGCCAAGC TGTTCGGTAT CACCGATGGC
GGCGTTGAGG CTCTAAAGGC CGAAATCCGC AAGAACATGA GCCGTGAGCT GGAACAGGCC
CTGAAAGCCA ACGTGAAAGA GCAGGTGATC AACGGTCTGC TGGCCGCCAA CGACATCGAG
CTGCCAAAGG CCCTGATCGA CGGCGAAATC AACGTACTGC GTCGTCAAGC TGTTCAGCGT
TTCGGTGGCA ATGCTGCCAA CATGCCTGAG CTGCCAGCCG AGTTGTTTGC TGAGCAAGCC
GAGCGCCGTG TAAAAGTGGG CCTGCTGCTG GGTGAAGTTA TCAAATCTAC CGAGCTGAAA
GTAGAAGAAG AACGCGTTCA GGCGCTGATC GCTTCTATGG CTTCTGCCTA CGAAGATCCA
GCCGAAGTGA TTGAATACTA CAACGGCAAC AAAGAGCTGA TGCAGAACAT GCGCAACGTG
GCTCTGGAAG AGCAAGCCGT TGAAGCTCTG CTGAAATCTG CAAAAGTGAC CGAGAAGGAA
GTTGCTTTTG AAGAATTTAT GAACAAGGCT ACCGGCCGCG CTTAA
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| Protein sequence | MQVSVETTQG LERRLTISVP AEQIEKLVNE SLKREAKRAR IPGFRPGKVP MSVVSKRYGA
AIRQDVTGEI MQRNFVEAII AEKLNPAGAP TFMPGASDAD KFEFVATFEV YPEVELKGLD
AIEVEQPKAD VTDADVDSMI ETLRKQHATF DAAPRAAEEG DKVVINFVGS VDGEEFQGGK
AEGFELQLGS GRMIPGFEEG IKGHKAGEEF EIDVTFPEEY HAENLKGKAA KFAITLTEVK
AANLPEVNDE FAKLFGITDG GVEALKAEIR KNMSRELEQA LKANVKEQVI NGLLAANDIE
LPKALIDGEI NVLRRQAVQR FGGNAANMPE LPAELFAEQA ERRVKVGLLL GEVIKSTELK
VEEERVQALI ASMASAYEDP AEVIEYYNGN KELMQNMRNV ALEEQAVEAL LKSAKVTEKE
VAFEEFMNKA TGRA
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