| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1211 |
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| Symbol | |
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| ID | 4603463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1489054 |
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| End bp | 1490973 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780558 |
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| Product | decaheme cytochrome c MtrF |
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| Protein accession | YP_927088 |
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| Protein GI | 119774348 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCA GCAAAAGAAT AAGTATTAAA CGCCTTTGCC GCCTGCCACT GGCGGGAGCA
ACTCTGCTGG CACTGACCGC CTGTGGCGGC AGTGATGGCG ATTCCGGAAA GCCCGGCGAT
CCGGGCGGCG AACCGGCGAT GACGATTCAA AGCCTGCACG TGGAATTTAT GGACGTCGGT
TTCACCGATG GCGTTGCCTC GGTAAAATAC CGGGTGACCA ACCAGGATGA TGAAGTGGTA
GTGGGCATAC CATCAGCCAC CTTTATCGCA GCCCAGTTGG TACCCGAAGG CTATACCGGC
GCTGGCAATG CCAGCACCTG GCAATACTTC GGCTCTGAAA ACTGCGCCGC CACCTGCCCC
GGCAGCTATA CCGACCTCAA AACCGGTATC TATACATACA GTTTCAGCGC CCCCTTTGAT
GGCATGAACG GTCAAAGCCT GATAGACGGC GCCACCCAAC GTTTGGTGAT CAAGCTTGGC
GGCGATAGCC TGCCCGACGG CACGCCGTTG CCCATTACCA ATGCCCACAA GGACTGGCAA
AGCGCTGGCG AACCTGCCTA TACCCGTAAT ATTGTCAGTA TCGACACCTG TAACAGTTGT
CACAGCAATC TGGCCTTCCA TGGCAGCAGA TACAATCAAG TCGAAACCTG TGTCACCTGC
CACAATGCCA CCCGGGTATC CAATCCCGCG AATGTGTTTG CGCCCATGGT GCATAGCAAA
CACCTGGCAG GGTTTCCCCA GCCATTGGCC GATTGCGAGA CATGCCACAA AAACGATGCG
GCGCTCGCCG ACAATCAGAA TTGGCACAAA ATCCCCACCA TGGAGGCCTG TGGGAGCTGT
CATACCAACA TTAATTTCCC CGCAGGTGAA GGACACCCTG CACAGCCAAC CAACGCCAAT
TGTGTAGCCT GTCACAACGC AGACTGGACT GCCGAGGTGC ACTCCGATAA AGCAAACGAC
GATGCACTGG CCGCCTTTGA GGTACAGCTG ACATCTGCCA GCATGGCCGC AGGTACTGTC
ACTGTGGGCG TCAAACTCGT CAATCCGCAA AGTGGTGAAG TCTACGGCGC CGCCGACAGC
CTGGACTTCG TGTCGGATTT GCGCCTCTAC GCCAACTGGG GCGGCAGCAT GGATTACACC
ACCCGCAGCG CCCGCTCAAT AAGACTGCAA AGCACGGCGG CTGTGGCCTC TGAAAATGGA
GTAAACAGCT ATCAGATCAC CGGGCTGACC GTGCCTGCGG GTACAGAAGC AGACACCGGC
ACCCTTGCTG TTCAAGGCCG CGTTTGCGCT GCCGATGGCA AGCTGGTTGC CTGTGGTGAT
GGTGTAGATG TGCTGGTTAT CAAATCATCG CACCGCTTCT TTGATGCTTC CATGCTGACC
ACTGCCGGAC GTCGCACCGT GGTGACCAAC GAAACATGTG GTAATTGTCA TGGCGATCAG
AAGCTTAACT TCCATGGTGC CCGCAACGAT TTGGAGGGCC AGTGCCAGCT GTGTCACAAC
CACAATATGC AGGCGGATGC CACTGCCGCC AACCCTGCCC ATACAACGGC TGACTTCAAG
CAGCTCATTC ATGCACTGCA CAGGGGCAAA TTTGAAGGCT TCGAGACCCT CAACTATCCC
GGCAACATTG GCAACTGCGC CCAGTGCCAC ACCAACAACG CCGATGGCGT ACTCAGCATA
GCGCTGCCGC TTTCTGCAGC GGTGCAGCCC ATGGCATTGA ATGATGGCAG CTTTACCAGT
CCCACCGCAG CCATATGCAG TAACTGCCAC GAGTCCGACA GCGCCAAAAA CCACATGACC
CAACAGGGTG GCGTGTTTGC CGGAACCAAG GCCGATGCCA GCGCGGGCAC CGAAAGCTGC
AACACCTGTC ACAGCCAGGG TGGCATGGCC GATGTGCTTA AGGTTCACCC AATTCATTGA
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| Protein sequence | MSISKRISIK RLCRLPLAGA TLLALTACGG SDGDSGKPGD PGGEPAMTIQ SLHVEFMDVG
FTDGVASVKY RVTNQDDEVV VGIPSATFIA AQLVPEGYTG AGNASTWQYF GSENCAATCP
GSYTDLKTGI YTYSFSAPFD GMNGQSLIDG ATQRLVIKLG GDSLPDGTPL PITNAHKDWQ
SAGEPAYTRN IVSIDTCNSC HSNLAFHGSR YNQVETCVTC HNATRVSNPA NVFAPMVHSK
HLAGFPQPLA DCETCHKNDA ALADNQNWHK IPTMEACGSC HTNINFPAGE GHPAQPTNAN
CVACHNADWT AEVHSDKAND DALAAFEVQL TSASMAAGTV TVGVKLVNPQ SGEVYGAADS
LDFVSDLRLY ANWGGSMDYT TRSARSIRLQ STAAVASENG VNSYQITGLT VPAGTEADTG
TLAVQGRVCA ADGKLVACGD GVDVLVIKSS HRFFDASMLT TAGRRTVVTN ETCGNCHGDQ
KLNFHGARND LEGQCQLCHN HNMQADATAA NPAHTTADFK QLIHALHRGK FEGFETLNYP
GNIGNCAQCH TNNADGVLSI ALPLSAAVQP MALNDGSFTS PTAAICSNCH ESDSAKNHMT
QQGGVFAGTK ADASAGTESC NTCHSQGGMA DVLKVHPIH
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