| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1210 |
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| Symbol | |
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| ID | 4603462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1486776 |
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| End bp | 1488959 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780557 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_927087 |
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| Protein GI | 119774347 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.260087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCC AAAGACAGGT GTACAGGACT ACCCGCCTGG CGTTGGCCGC CCTGATATCG
CTGACACTAT TTGCCTGTGG CAGCGACGGT GAGGACGGTA AAGATGGCGA GGACGGCGTT
GTTGGCGTCA ATATTGATTC TACTGCCACG CTTAAGGTGA ACTTCACCGA TGCCAGGGTC
GAAGATGGCA AAGTCACTGC CGACTTTATA CTGACCAATG CCAATGGCGT TGCTGTGCTT
GGGTTAACCA AGGCGCACGA CCTCCGATTT GGCATCGCCC AGTTAACCCA GGTTACCCAA
ACCATAGGTA CGGGAGACGA GGCCAGAGAA GCCGACCTGG GTTATCAGTG GCAGGCCTAT
ATCAACAGTC TTCGCCAGCC AGGCACAGTG CCGGAAGGTG TGGATGGCCT TAACCCGTCC
CCCCAATATC AGGCGGGCGT GGAAGCCGCC AACGGTTGTG ATACCTGCTT GGTTGACCAT
GGCGACGGCA GCTACAGCTA CAGTTTTCAG GTGAACATCG CCCAGGTCAC AGAACCACTG
GCGGTAGTTT ACAATGCGGA TGCCACCCAA AGGATCACCA TGGAGCTGAA GCTGCCTCAG
GTGGTTGCAA ACGGTCATTT CGATTGGCAG CCCTCCAGCG GCAACACCGA AGGCATTCAA
ACCCGAAATG TGGTCACCAT CAAGGCCTGT TATACCTGTC ACCAACCGGA AAGCCTGGAG
TTACACGGTG GACGCAGGCT GGATCTGGAA AACTGTGTTG CTTGCCATAC GGCAACCTCC
GGCGATCCTG AATCGGGCAA CAGTGTCGAA TTCACCTACC TTATTCACGC CATCCACCGT
GGTGCAGAAC GTCATACCTT TGATGCCGAT GGCAATCAGG TAGACGACCC GTACAAGATT
GTGGGATTCG GCGGCAGTGT GCATGACTAT GGTTTGGTGC ACTTCCCGAG AAAACCGGCG
TCCGACTGCA GTGTGTGTCA CCAGGAAGGC ACAGGTGCAC CCGCAGACGC CGCGCTCTTC
AAAGCCGAAA AGAGCAACAC CGCCTGCGTG GCCTGCCACT CGGAAAAGCC CTCCTCCCAT
CACGCCAGCA CTGACTGTAT GGCATGCCAC AATACCGACA ACACTTACCA TGGCACCGGC
AGCCCTACCA AACGCCACGG CGATGTAATG AAGGCCTACA CTCTGGCAAG CGAGCTGAGC
GTCAAAGTAC TCGATGTCAG TGCCAATGCA GGCAAAATGA CCTTTAAGGT GCAGGTGCTG
GACAAAAATG GCGCACCGAT GGACCAGACG TTTATCAACC AAAGCAGCCG CATGGTCGTG
GCCTGGGATG TAGATAAAGA CTATCCCGCC TACAATGAAG CCTCCTACAG CAATCGTCGC
ATTCGCTTGA GCGAAGGCAG CTACGATGCC ACCGAGAAAA GCTACACGCT GACGCCAAGT
GCGGCTCTGC CTGCAATGCC GGACGGAAAG AGCTTTGAGA TTTGGTCCAC ACTGGAGGCC
TGTTTCAATA ACGGTGGTTA TGGGGTTGAA GATATACAAC TGACTGATTG CAGTGCTGAT
GGGGTCAGAA CCGTTGCCAT TAAAGAAAGC CCCTATCGCT TTGTTTGGGG CAATAATGGT
ATCGACAGCT CGCAGCCAGC GGCTATGCGC CGTGCCATTA TCGACACCGC CAAGTGCCAG
GCGTGCCATG GTCAGGAAAT TCACCACTAT GACAACGGCG TCAATTGCCA GACATGCCAC
ACCTCGGATA AAACACTGAG AAACAGTACA ACCTATCCCG GTGGTCGTAT GCCCAGCAGC
TTTGCCTGGA AGGCACACGA GCGTGAAGGC CACTATCTCA AGTATGGCGG GCTGCAATCG
GGAACCGTGC TCAAGACCGA TTGCGCCACC TGCCACACCG AAGCTGGCAA CAGCGTTACC
GGCATCACCC TTGGTCGAGC ACCTGAACGT GTGTGGCGCT ATGGTGACAC TCAAAACAAT
GGTGCCGAAA TCTGGGTCTC TTCCGATGCA GGAAGTTGCC TGAGCTGCCA CCAACAATAC
TTGAGTGATG CCGCCAAATC ACACATCACG GCCAACGGCG GTATTCTGGA TGGAATGGAT
GAGGCCGATG TCCGCAATCG TGCCAAAGAA ACCTGTTCTA CCTGCCATAC GCCAACGCAG
CTAATGGAAG TTCACGGCAA CTGA
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| Protein sequence | MNFQRQVYRT TRLALAALIS LTLFACGSDG EDGKDGEDGV VGVNIDSTAT LKVNFTDARV
EDGKVTADFI LTNANGVAVL GLTKAHDLRF GIAQLTQVTQ TIGTGDEARE ADLGYQWQAY
INSLRQPGTV PEGVDGLNPS PQYQAGVEAA NGCDTCLVDH GDGSYSYSFQ VNIAQVTEPL
AVVYNADATQ RITMELKLPQ VVANGHFDWQ PSSGNTEGIQ TRNVVTIKAC YTCHQPESLE
LHGGRRLDLE NCVACHTATS GDPESGNSVE FTYLIHAIHR GAERHTFDAD GNQVDDPYKI
VGFGGSVHDY GLVHFPRKPA SDCSVCHQEG TGAPADAALF KAEKSNTACV ACHSEKPSSH
HASTDCMACH NTDNTYHGTG SPTKRHGDVM KAYTLASELS VKVLDVSANA GKMTFKVQVL
DKNGAPMDQT FINQSSRMVV AWDVDKDYPA YNEASYSNRR IRLSEGSYDA TEKSYTLTPS
AALPAMPDGK SFEIWSTLEA CFNNGGYGVE DIQLTDCSAD GVRTVAIKES PYRFVWGNNG
IDSSQPAAMR RAIIDTAKCQ ACHGQEIHHY DNGVNCQTCH TSDKTLRNST TYPGGRMPSS
FAWKAHEREG HYLKYGGLQS GTVLKTDCAT CHTEAGNSVT GITLGRAPER VWRYGDTQNN
GAEIWVSSDA GSCLSCHQQY LSDAAKSHIT ANGGILDGMD EADVRNRAKE TCSTCHTPTQ
LMEVHGN
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