| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1208 |
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| Symbol | |
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| ID | 4603460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1481971 |
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| End bp | 1483941 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780555 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_927085 |
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| Protein GI | 119774345 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.474569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.550051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACA CACAAAAAAC CAAAATCGCA CTGCTGATAG CAGCCAGCGC CCTGGGCTTA
ACCGCCTGTG GTGGCAGTGA TGGCAGCGAC GGCAACCCAG GTAACCCGGG CGGAGAGCCT
GCAGGTTCCA TTGCCGAACT GCATTTCACC TTCAACGATA CCCGCATTAA CGACGGTATC
ACCAAGGTCG AATTCACCGT GACCAACGAA GAAGACAAAC CCGTTGTTGG TCTGCAAAAA
ATGCGCTTCT ATGCCGAGCA GCTGCTACCT GAAGGTGCAA CCGGTGCAGG TAACAGCTCC
CAGTGGGAAT ACCTGCTGGA CGAAACCTGT GACCTGCCAG CCGCCAAGTG TCCAGGCACT
TTCGTAGACC ACAAAAATGG TCGCTACAGC TACACCTTCG GTGCCAACCT GGCCGACTCT
ACCCGCTCAG AATACAAGGC TCAGCTGGCC CAGCGTCTGG TGATCCGTAA CTACAACGTG
CCCCTGCCAG ATGGCACCAC AGTGCCCGGC ACCACCGCCC TGACCGACTT TATGGGCGAC
TCAGGTGCTG ATGCCTTCTA CAGCCGCAAA ATTGTTGCCA CCGAAAGCTG TAACGCCTGT
CACGGTGACG TACAGGAAGC TGGCCACATG ACTGGTGATG TTAACTTCTG CGCCAGCTGC
CACACCCCCG GTCGCGTGAG TGAAGGCAAA GAGTTCAACG TCTTCATCCA CGACATCCAC
TTCAACCTGG ATGACGCCGA CAACAAGATT AAACCCGCCT TTGGCGTTGC CGCACTGGAA
AACTGCCAGA GCTGCCACGT TGAGACCGAA GTTGCCCCCG ATTGGGCCAA CTGGACCCGT
ATCCCTACCG CTCAAAGCTG TGGCAGCTGC CACACCAATA TCGACTTTGC CGCCGGGAAA
GGCCACTCCA TGCAGGCCGA TAACAGCAAC TGCGTAGCCT GTCACAACAG CGACTGGACC
GCCGAGCTGC ACACCGCTCA GGGTAAGGCC GCAAAAGAGC TGGTCGCCAA GCTTGGCATG
AGCACCACTC TGGTCGGTAA TGAGGACAAT AGCGCGACGC TGACTCTGGT GATTACCGAT
GCTGCCGGCA ATGCGGTAGA TGCCAATAGC CTGATGACCA AAATCCAGCG TATTGAAACC
ATCACCAACG TGGGCCCTAA CTTCCCCATC ATGGGCTACA ACCCAAGCCC AGGAAATGGT
CAGAAGAAAG TGACCAAAGA TCTGGTGAAG TCAGGCGCAT TGCAAGCCGA TGTGACTGTG
GTTGACGGCA AGCTGGTATA CACCATACCT GCCCTGCCTT TCGGTGCTGG CGATACCAAT
ACCGCCTTTA CCTTCGTTGG TCTGGAAATG TGTGTCAGCG GCACCGAGTT TGTTGACTGT
GGCGACGGTG TTGCTACCCA GTCAATGAAG GCTCAACTGG CCCACGGTAC CAAGGCAGGC
GAGACTGCAA ACTTCCGCCA TATCGACTCG GTGAACTTTG CCAGCTGTCA GGGCTGTCAC
GGTGAAACCT TTGACATTCA CAAGGGCTAT CACGCCGGCT TTATCATGAG TGAGCAGCTG
GGCCGCGAAG TGAACGGTAA GCTGACTGTG GGCGTCGATG CCTGTGTGGC CTGTCACACC
CCTGACGGTA CATATGCCGG TGGCGCCAAC AAAGGTGCGT TCGAGATGAA GCTGCACGTG
GTGCACGGTA AAGAAGGCGT CTTCAACGAC TGCCGTCAGT GTCACAACGA CTTCAACCTG
GATGCCTTCA AGATGAAGGG TGCTCTGGCC ACATCTGCCG GTAAGTACAC CACGCCCATC
ACGGCCACCT GTACCTCTTG CCACAGCCAG GAAAGCATTG GCCACGGTCT GACCAACATG
GGTGCCATCG TCGACGGTGA CTATGTGGAA GCCAACCAGG CGGCGCAGCA GGAAACCTGT
TTCTTCTGTC ACCAGCCAAG TGTTACCGAC CACACTGTGG TGAAAATGTA A
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| Protein sequence | MMNTQKTKIA LLIAASALGL TACGGSDGSD GNPGNPGGEP AGSIAELHFT FNDTRINDGI
TKVEFTVTNE EDKPVVGLQK MRFYAEQLLP EGATGAGNSS QWEYLLDETC DLPAAKCPGT
FVDHKNGRYS YTFGANLADS TRSEYKAQLA QRLVIRNYNV PLPDGTTVPG TTALTDFMGD
SGADAFYSRK IVATESCNAC HGDVQEAGHM TGDVNFCASC HTPGRVSEGK EFNVFIHDIH
FNLDDADNKI KPAFGVAALE NCQSCHVETE VAPDWANWTR IPTAQSCGSC HTNIDFAAGK
GHSMQADNSN CVACHNSDWT AELHTAQGKA AKELVAKLGM STTLVGNEDN SATLTLVITD
AAGNAVDANS LMTKIQRIET ITNVGPNFPI MGYNPSPGNG QKKVTKDLVK SGALQADVTV
VDGKLVYTIP ALPFGAGDTN TAFTFVGLEM CVSGTEFVDC GDGVATQSMK AQLAHGTKAG
ETANFRHIDS VNFASCQGCH GETFDIHKGY HAGFIMSEQL GREVNGKLTV GVDACVACHT
PDGTYAGGAN KGAFEMKLHV VHGKEGVFND CRQCHNDFNL DAFKMKGALA TSAGKYTTPI
TATCTSCHSQ ESIGHGLTNM GAIVDGDYVE ANQAAQQETC FFCHQPSVTD HTVVKM
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