Gene Sama_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1190 
Symbol 
ID4603442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1458359 
End bp1458742 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content56% 
IMG OID639780537 
Productglyoxalase family protein 
Protein accessionYP_927067 
Protein GI119774327 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.939066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAA CTCAACCTCT GGTATGGGGC GAAATCGCTG TCACTGATAT GGCCAGAGCC 
ATCGCCTTCT ACCAAGCCCA GTTTGACGTG AGTTTTCGCC GGGAAGACAT GGATGAGGTG
GAATACGCCA TCCTCGAATG CAGTGATGAG AAGGCGGCCA CCATCGGATT GATGAAACAC
CCCGAGTTCA AGCCAGGCCA GGGCGGCGCC TGTCTGTACC TGCATCTGAC GGATAACTTG
GGTCAGCTTG TGGGTAAACT GGAGCACAAC CAGGTGCAAA TTGTCATGCC TCCCATGGGC
ATCAAGGGCG GTGAATGTGG CTACATAGCC CTGTTTGTCG ACAGCGAAGG CAACACAGTC
GGCCTGTGGA GCCCGGCGCT CTGA
 
Protein sequence
MQATQPLVWG EIAVTDMARA IAFYQAQFDV SFRREDMDEV EYAILECSDE KAATIGLMKH 
PEFKPGQGGA CLYLHLTDNL GQLVGKLEHN QVQIVMPPMG IKGGECGYIA LFVDSEGNTV
GLWSPAL