| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1187 |
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| Symbol | |
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| ID | 4603439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1451754 |
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| End bp | 1452635 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780534 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_927064 |
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| Protein GI | 119774324 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAGCA TTAAAAACCT CACCAAGACC TACGATAACG GGGTGAAAGC CCTGAACCAT
GTCAATCTGG AAATCCCCAA GGGTATGTTT GGCCTGCTGG GGCCCAACGG GGCCGGAAAA
TCCAGCCTGA TGCGTACCAT TGCAACCCTG CAATCGGCCG ACAGTGGCAG CATTCATTTT
GATGGCATAG ATGTGATGGC CGATCCCATG AAACTGCGCA CCATGCTGGG TTATTTACCT
CAGGATTTTA ACGTGTACCC CCGCGTAACG GCGTTGGATT TACTGGACCA TCTGGCGGTG
CTTAAAGGCA TTGGTAACGC CAAAGAGCGC AAGGAAATCG TTGAAGGTCT GCTGGCTCAC
ACCAACCTTT ATCAACACAG ATTCAAATCG GTCAGCGGTT ACTCTGGTGG CATGCGCCAG
CGTTTTGGCA TTGCCCAAGC GCTGCTTGGC GATCCCAAGC TGCTGATTGT GGACGAGCCC
ACGGCAGGTC TTGACCCCGA AGAGCGCAAC CGTTTCCACA ACTTGCTGGT TAGCCTTGGC
GAGGAGCGGG TAGTTATTCT CTCAACCCAC ATTGTGGAAG ACGTAGCCGA ATTGTGCCCA
CAAATGGCTG TTCTGGCATC GGGCAGCATA TTGCTCGAAG GTAACCCACA ACAGCTGGTG
GATTCCCTGA ATGGCAGGAT CTGGCGCCGT ACCGTGTCAC AGCAGGAAGC CGCAGAACTC
GAAGCGCGTC TGCCGGTGAT TTCCAAGCGT CTGTTTGCCG GTCGCACTGT GCTGAATGTG
ATGTCGGATG CCTGTCCTGA AGGGTTTGAA GGCACGGATG CCGGGCTTGA GGACTTGTAT
TTCTCGACCC TGCACAGCCA CAGAAGCCAT CAGGCCGCAT AA
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| Protein sequence | MLSIKNLTKT YDNGVKALNH VNLEIPKGMF GLLGPNGAGK SSLMRTIATL QSADSGSIHF
DGIDVMADPM KLRTMLGYLP QDFNVYPRVT ALDLLDHLAV LKGIGNAKER KEIVEGLLAH
TNLYQHRFKS VSGYSGGMRQ RFGIAQALLG DPKLLIVDEP TAGLDPEERN RFHNLLVSLG
EERVVILSTH IVEDVAELCP QMAVLASGSI LLEGNPQQLV DSLNGRIWRR TVSQQEAAEL
EARLPVISKR LFAGRTVLNV MSDACPEGFE GTDAGLEDLY FSTLHSHRSH QAA
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