Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1186 |
Symbol | |
ID | 4603438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1450270 |
End bp | 1451466 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639780533 |
Product | Slt family transglycosylase |
Protein accession | YP_927063 |
Protein GI | 119774323 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAATA CAGTCATTTT AGATACTCTG CCCGGGAGGC GTCCTGCACT CAGCAAAGGC TGGTTCGTGT TGCTGCTGAC GCTGACCATC CTTGCCGGTT GTCAGGTTAA TACAGACACA TCCGGGGAGC CCTGGGAGAC GGACGCCCAA CCTCAGCCCG AGCAGGTCCC CCTTGTCGTC AAAGAAGCCA CAGCCCCTTC CGAGCCCGCT CTGCCTGAAG CTGAAGCCAA AGCCTACCAG AATTTATGGC AAAAAATTGC CGATGCACAG ACGATAGCTG TGCCTTCCCA CAGCGAAGTC ACCTATTTTC TTGGGCTTAA CCGCAATAAT GGCCTCTTCC CCATTAATGC CCCCGCTGCT GCCGAGCCCT GGCTGTACGA CATCATCAGT GAATTGGAAG CAAGGGACAT GCCCCTTGAG CTCGCGCTGC TGCCATTGAT TGAAAGCGGC TATCATCCGG GCGTCAAGGG ACTGGGGGGC GCAGGGCTGT GGCAACTTTC CGCCCAAACA GGCCGCAATC ATCACCTCAG GGTTAACCAA AGCTTCGATG GCAGGCTGGA CCCCATTCCG GCTACCCGTG CAGCGCTGGA TTATCTTCTT TACCTGTATG AGATGTTCAA TAACGACTGG CTCTCAGCGG TTGCCGCCTA CAACATGGGT GAAGGTAAAC TGAAAACGGC CATCGAGCGC AATCGCCGCA AGGGCAAGGC GGAGGACTTT CTGGCGCTGG GCTTGAGCCG CAATCAGGCG CCCACCCTGT ACAAATGGTT GGCGGCGCTG GCGGTTTTAC GGGACCCACA AACTCAATCA GCCAGTTTCC CGCCCATTGC CAACGCGCCT GTCTTGGCAA GGGAAGCGGT GCCCAACGGC GTGGCCCTGT CCAATATTGC CCAGGCCATG GGTATGTCAG CCAAGGAACT GTCCAGACTG AATCCAGCCT TCAGGGACGG CATTGTGCCT TTCAGCGGCA AATATCAAAT CAACCTGCCA GAATCCCGGC TGCCCGCCCT TAACGCAGCA CTGGTGAACT TAAGGCCGTC TACCCCTGGC AAGGGCGGCA GTTATCAGGT GAAATCAGGG GATACCCTGA GTGGCATCGC CAAGCGCCAT GGAATGCGTC TGGACAAGCT GTTGTCTCTG AATGGACTCA ATATGAAGAG CATTATCAAA CCCGGGCAAC AGTTGCGGCT GGAGTAA
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Protein sequence | MGNTVILDTL PGRRPALSKG WFVLLLTLTI LAGCQVNTDT SGEPWETDAQ PQPEQVPLVV KEATAPSEPA LPEAEAKAYQ NLWQKIADAQ TIAVPSHSEV TYFLGLNRNN GLFPINAPAA AEPWLYDIIS ELEARDMPLE LALLPLIESG YHPGVKGLGG AGLWQLSAQT GRNHHLRVNQ SFDGRLDPIP ATRAALDYLL YLYEMFNNDW LSAVAAYNMG EGKLKTAIER NRRKGKAEDF LALGLSRNQA PTLYKWLAAL AVLRDPQTQS ASFPPIANAP VLAREAVPNG VALSNIAQAM GMSAKELSRL NPAFRDGIVP FSGKYQINLP ESRLPALNAA LVNLRPSTPG KGGSYQVKSG DTLSGIAKRH GMRLDKLLSL NGLNMKSIIK PGQQLRLE
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