| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1185 |
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| Symbol | |
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| ID | 4603437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1449086 |
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| End bp | 1450141 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639780532 |
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| Product | steroid dehydrogenase |
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| Protein accession | YP_927062 |
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| Protein GI | 119774322 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.809029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGG CGTATCCTTT GCATCCGGCG CAGCTGGAGG CCGCCAAACG CCTTAAGACC
CACGTCAGCC GCGTACTGGT GACAGGCGCA GGGGGCTTTT TGGGGCAGGC GCTGTGTCGG
CAATTGCTCA GTGCCGGCAT TGAGGTTGTC GGCATTGCCC GCTCTGCCTA TCCAGCCCTC
GCAGCCATGG GGGTGGAGAT GCACCGTGGC GACATTATGG ACCTTAAGGC TTTGTCTGCT
GCGATGAACG GCTGCGAGCT GGTGTTTCAT GTGGCGTCCA AGGCCGGGGT TTGGGGCAGC
CGTGAAAGCT ACTATGGCCC CAATGTAACC GGGGCGGCCA ATGTGCTGCA GGCAAGCCAG
GATCTGGGTA TCAAAGCCAT TGTGTACACC AGTACTCCCA GTGTGACCTT TGATGGCAAA
GATGAATCGG GTATCGATGA GTCTGCCCCT TATGCGGCGC ATTTTTTGAA TCATTATGGT
GCATCCAAAG CGGAGGCGGA GGCCATGATG CTGCGGGCGA GCTCGCCGTC TCTGGTCATC
ACGGCGCTGC GGCCCCATCT TATTTGGGGA CCAAAGGATC CGCATCTGGT GCCCAGAGTG
CTGGAGCGTG GCCGCGCCGG TCGTCTTCGC CTCCTGGGTG CCGAAGACAA GCTGGTGGAT
ACCATTTACG TGGACAACGC CGCCCATGCC CATGTACTGG CGGCGATTGC TTTGCTCGAA
AAGCCCGGCG AGTGTGGCGG CAGGGCATTT TTCCTCAGCA ACGGCGAGCC GGTCACCATG
GCGTCCATGC TGTCGAAAAT TCTCGCCTGC GCAGAGCTGC CGGGCGTGAC CCGTCGGGTA
CCTGTGTGGC TTGCTTACGG TATGGGCGCG GTTTTGGAAG GAATGTATAC GCTTCTTGGC
AAACAGGACG AACCCCTGAT GACCCGCTTT GTGGCCAGGC AGCTCTCTTG CAGCCACTAC
TACGATATCA GTGCCGCGCG GGAGATTTTA GACTACGAGC CGCTGATTTC TCTGGATGAG
GGGATGGCGC GGCTCAAGGC GTCACTTCAG CCGTAA
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| Protein sequence | MTQAYPLHPA QLEAAKRLKT HVSRVLVTGA GGFLGQALCR QLLSAGIEVV GIARSAYPAL
AAMGVEMHRG DIMDLKALSA AMNGCELVFH VASKAGVWGS RESYYGPNVT GAANVLQASQ
DLGIKAIVYT STPSVTFDGK DESGIDESAP YAAHFLNHYG ASKAEAEAMM LRASSPSLVI
TALRPHLIWG PKDPHLVPRV LERGRAGRLR LLGAEDKLVD TIYVDNAAHA HVLAAIALLE
KPGECGGRAF FLSNGEPVTM ASMLSKILAC AELPGVTRRV PVWLAYGMGA VLEGMYTLLG
KQDEPLMTRF VARQLSCSHY YDISAAREIL DYEPLISLDE GMARLKASLQ P
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