Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1178 |
Symbol | |
ID | 4603430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1439543 |
End bp | 1440259 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780525 |
Product | Beta-lactamase |
Protein accession | YP_927055 |
Protein GI | 119774315 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.188267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGATTG CAATAAGCTG GTGTACTGCG TTGATGATAG GGACTATTGC CAATACGCAG GCACTGGAAA TCACGCCCTT GTCTGATGGG CTTTTCCTGC ACCAGAGCGA GAAAGAAGTC GAAGGCTTTG GCAAAGTCTC CGCCAATGGT CTGATAATCG TGGATGGCAA AGAGGCGTTT GTGGTGGATA CGCCCTGGAC GGATGCCGAT GCAGAGGCCT TGCTCGAATG GACAAAGGCT AAAGACTTAA CCGTAAAAGC CGTGCTCGCC ACCCATTGGC ATGAAGACAG GGCCGGCAGC TTTGGGGTAT TTGAGAGAGC CGGTATCGCC ACCCTAAGCT CTGAGGCGAC CCAGGCCCTT TTGAGGCAAC ATCAAAAGAC GCTGGCGACC CACACCTTCA GTGGCGACGA AATACAGTAT TTTGGCAACA AGGTAGAGGT GTTTTATCCC GGTGCTGGCC ATGCGATGGA TAATCTGGTG GTGTACCTGC CTCACGAAAA GCTGCTCTTT GGCGGCTGCC TGGTGCGGGA GGCGTCAACC CGGTTTATGG GGTTTTATGG CGATGGCTCA TTGCCTGACT GGCCTGAGTC CATGTCGCGG CTGATAGCGA AATTCCCTGA AGTCATCACA GTGGTGCCGG GCCATGGCGC GCTGGGGGAT AAGCGCCTGC TTGAACACAC AAGGGGGCTG GCAGAGGCCG CGCTCAAGGC ACAATAA
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Protein sequence | MRIAISWCTA LMIGTIANTQ ALEITPLSDG LFLHQSEKEV EGFGKVSANG LIIVDGKEAF VVDTPWTDAD AEALLEWTKA KDLTVKAVLA THWHEDRAGS FGVFERAGIA TLSSEATQAL LRQHQKTLAT HTFSGDEIQY FGNKVEVFYP GAGHAMDNLV VYLPHEKLLF GGCLVREAST RFMGFYGDGS LPDWPESMSR LIAKFPEVIT VVPGHGALGD KRLLEHTRGL AEAALKAQ
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