Gene Sama_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1176 
Symbol 
ID4603428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1437410 
End bp1437766 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content50% 
IMG OID639780523 
Producthypothetical protein 
Protein accessionYP_927053 
Protein GI119774313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.70736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAA GTAAACTCGA TAAGGTATTG GCTGCAGAGC GCGAATACCG TGAAAAACGT 
GAAGGTGGCT ATCGCGAAAA GGCGCTGAAG CTTTATCCCT GGGTGTGTGG CCGCTGTGCC
CGTGAATTTA CCCATAAAAA CCTGTCGGAA CTGACGGTGC ACCATAGGGA CCATAATCAC
GACAATAACC CGCCTGATGG TTCTAACTGG GAGCTGCTGT GCCTTTACTG CCACGATAAT
GAGCACTCCC GTTTTGAAGA GCTTATTCGC TATGGCAGTA CCCAGGAGGC GAAGCAAGAG
GCGGCAACGT ACAATCCCTT TGCCGATCTT AAATCCCTGA TGTCGAATAA GAAGTAA
 
Protein sequence
MTQSKLDKVL AAEREYREKR EGGYREKALK LYPWVCGRCA REFTHKNLSE LTVHHRDHNH 
DNNPPDGSNW ELLCLYCHDN EHSRFEELIR YGSTQEAKQE AATYNPFADL KSLMSNKK