| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1173 |
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| Symbol | |
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| ID | 4603425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1432999 |
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| End bp | 1433577 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780520 |
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| Product | thymidine kinase |
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| Protein accession | YP_927050 |
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| Protein GI | 119774310 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1435] Thymidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTCAGC TCTATTTTTA TTACTCGGCA ATGAATGCCG GCAAATCCAC CTCGCTGCTA
CAGTCTTCCT ATAACTACCG CGAACGGGGC ATGAATACCC TGGTGCTGAC CGCCGCCATT
GACGACAGAT ATGGCGTGGG TAAGGTGGCT TCACGTATCG GCATTCAGGC CGACGCCACC
GTGTTTGGCA GTGAAGATAA CCTGATGGAT TTGATTGCCA CTCACCACAG TCAGCAGCAA
CTGCACTGCG TGTTGGTGGA TGAGAGCCAG TTTTTGTCCA AAACCCAGGT GCGTCAGCTT
ACCGATGTGG TGGATAAGCT CGATATCCCT GTGCTTTGTT ACGGCCTTCG CAGCGATTTT
CGCGGCGAGC TATTTATCGG CAGCCAGTAT CTGCTGGCCT GGGCCGATAA GCTGGTGGAG
CTGAAAACCA TTTGTTTTTG TGGCCGCAAG GCCAACATGG TGGTGCGCCG TGATGGTGCC
GGGAATCCGG TGCGTGATGG TGCTCAGGTG GCCATTGGCG GCAACGAGAG CTACGAGTCC
ATGTGCCGCA AACACTTCAG TGAGCTGGTG TGGGACTGA
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| Protein sequence | MAQLYFYYSA MNAGKSTSLL QSSYNYRERG MNTLVLTAAI DDRYGVGKVA SRIGIQADAT
VFGSEDNLMD LIATHHSQQQ LHCVLVDESQ FLSKTQVRQL TDVVDKLDIP VLCYGLRSDF
RGELFIGSQY LLAWADKLVE LKTICFCGRK ANMVVRRDGA GNPVRDGAQV AIGGNESYES
MCRKHFSELV WD
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