| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1172 |
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| Symbol | |
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| ID | 4603424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1430689 |
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| End bp | 1432845 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780519 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_927049 |
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| Protein GI | 119774309 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAAAA GCCTTATCGC CCTTGCCGTA GGCGGCGCGC TCTTGTTGGG CGGCTGCGCC
CTTGGCCCGT CCGAAAGTGG CGTAAACAAT GGCGATGTAG CCACCGCTGT CGCCGTCATT
GGTGCTGACA ATCCCTTCTT CGCGCCAAGC GCACTGCAAT ATCAGGCGCC CAACTTTGCC
GCCATCAAGG ACAGCCATTT TGAACCAGCG CTGTTGCAGG GCATTGCCGA GCACAAGGCT
GAGATCCTGG CCATTGCCAA CAATCCTGAG CCAGCCACCT TTGAAAACAC CCTGGTGGCC
ATGGAAAAAA GCGGCGCCCT GCTGACCCGC ACCTCCAAGG TGTTCTATAA CCTGGCGGGC
ACCGACTCCA ACCCTACCCT GCAAGCACTC CAGGCCAAGA TGGCACCTTT GATGTCGGCT
CACTCTGACG ACATCAACCT GAACCCGACT CTGTTTGCCC GCATCGAAAG CCTGTACAAC
CAGCGCAACG ACCTTGGGCT CACCAAAGAA GAAGTGCGCC TGATTGAGGT GTACCATCAG
CGCTTTGTGA TGGCTGGCGC CAAGCTCACC GAAGCGCAGA AGACCCAAAT TCGTGCCCTG
AACGAAGAGC ACTCCAAGCT GACCGATGAA TTCCAGCAGC GCCTGCGTCG CCTGACCAAG
GAAATCGCCG TGGTGGTAAA CAGCAAAGAC GAGCTGGCGG GTCTGTCTGA CAGCGCTATT
CGTATGGCGG CAGCCGATGC CAAGGCCGCA GGCCATGACG GCAAGTTCCT GCTGTCTATC
ACCAACACCA CCCGTCAGCC AGTGCTGGCA CAGCTTGAAA ACCGTGAGCT GCGTAAGCGG
GTATTCGAAG CCTCTGCCAA CCGTGGCCTT GAAGGCGAAA ACGAAACTGC CTCTCTGGTT
GCCCGTCTGG CACAGCTTCG CGCCGAACGC GCTGCCCTGC TGGGCTTTGA CAACTGGGCC
AGCTATCGCC TGGCGCCACA AATGGCTGGC AGCCCTGAAG CCGTGTACGA GCTCTTTGGC
ACCATGGTGC CAAAAGTCGT GGCCAACACC CGCAAAGAGG CCGCCGACAT TCAGGCGATG
ATTGATAAAA CCGGTGGCAA TTTCGAGCTC AAGCCTTGGG ACTGGGCCTT CTACGCCGAA
AAAGTGCGTC AGGAAAAGTA CGCCCTGGAT GAAGAGAGCC TCAAGCCTTA CTTCGAATTC
AACCGGGTGC TGGAAGATGG CGTGTTCTAC ACCATCAAGG AACTCTACGG CCTGACCATG
AAGCCGCGCC CGGATCTGCC GGTATACCAC CCCGATGTAA AAGCCTATGA AATGTTCGAT
GAAGACGGCA CCAGCCTGGC CATCTTCTAC GCCGACTACT TTGCCCGCGA CGGCAAGCGT
GGCGGCGCCT GGAAGAGCTC CTTCGTGGAC CAGTCCGGTC TGCTGGGTAA CAAGCCAGTG
GTTGTGAACG TGATGAACAT CAAGAAGGCA CCGGACGGCG AGCCGACCTT TGTCAGCTAC
GATGAAGTGA CCACCATGTT CCACGAAATG GGTCACGGCA CCCACGGCAT GCTGTCAAAG
GTGAAATACC CAACGCTGGC AGGCACCAAG GTATCCCGCG ACTTCGTTGA GTTCCCATCC
ACCTTCGAAG AAGACTGGGC AGCCCACCCC AAGGTGCTGG CCAACTACGC CCGTCACTAT
CAGAGTGGCG AGCCGCTGCC AAAGCCATTG CTGGACAAGT TGCTCAAGTC ACGCAGCTTT
AACCAGGGCT TCGACACCCT GGAATACATG TCAGCCGCAC TGGTAGACCT GGAATGGCAC
TCACTGAAAG CCGGTGACAG CCTCAAAGAC GTTGCCAGCT TCGAAGCCGC TGCGCTCAAG
AAGCACGGTG TAGACATTGG AGCCGTGCCA CCACGTTACC GCTCAACCTA CTTCGCCCAC
GCCTTCCCGG GCGGCTACAG CGCCAGCTAC TACGCCTACA TGTGGTCTGA AATTTTGGCA
GCCGACGCCT ATGCCTATGT GCAAACCCAG GGCGGTCTGA ACCGTGAGAT TGGTATGAAG
TACCGCAAGA CCATTCGTGA AGTGGGCAAC AGCGTACCGC CTATGGAAGC CTACATTAAC
TTCCGTGGTC AGGAGCCTAC CACCGACGGT TTGCTGGAGC GCCGCGGCCT GAAATAA
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| Protein sequence | MHKSLIALAV GGALLLGGCA LGPSESGVNN GDVATAVAVI GADNPFFAPS ALQYQAPNFA
AIKDSHFEPA LLQGIAEHKA EILAIANNPE PATFENTLVA MEKSGALLTR TSKVFYNLAG
TDSNPTLQAL QAKMAPLMSA HSDDINLNPT LFARIESLYN QRNDLGLTKE EVRLIEVYHQ
RFVMAGAKLT EAQKTQIRAL NEEHSKLTDE FQQRLRRLTK EIAVVVNSKD ELAGLSDSAI
RMAAADAKAA GHDGKFLLSI TNTTRQPVLA QLENRELRKR VFEASANRGL EGENETASLV
ARLAQLRAER AALLGFDNWA SYRLAPQMAG SPEAVYELFG TMVPKVVANT RKEAADIQAM
IDKTGGNFEL KPWDWAFYAE KVRQEKYALD EESLKPYFEF NRVLEDGVFY TIKELYGLTM
KPRPDLPVYH PDVKAYEMFD EDGTSLAIFY ADYFARDGKR GGAWKSSFVD QSGLLGNKPV
VVNVMNIKKA PDGEPTFVSY DEVTTMFHEM GHGTHGMLSK VKYPTLAGTK VSRDFVEFPS
TFEEDWAAHP KVLANYARHY QSGEPLPKPL LDKLLKSRSF NQGFDTLEYM SAALVDLEWH
SLKAGDSLKD VASFEAAALK KHGVDIGAVP PRYRSTYFAH AFPGGYSASY YAYMWSEILA
ADAYAYVQTQ GGLNREIGMK YRKTIREVGN SVPPMEAYIN FRGQEPTTDG LLERRGLK
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