| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1171 |
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| Symbol | |
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| ID | 4603423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1429044 |
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| End bp | 1430606 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780518 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_927048 |
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| Protein GI | 119774308 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.299418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGA TAAGTTATGC CGACTCGGCG CTTTCCCTGC TGCCGCCGGT TGTGGCTATC
GTACTGGCGG TATTGACCCG CAAGGTACTC TTGTCCCTTG GTTTGGGGAT TTTGACCGGT
ACCCTGCTGC TGAACGATTT TGCCCCACTC GCCAGCGCTG AGTTTCTGGC TCACCGGGTT
ACCAATCTGG TGTGGAGCGA TGGTGCGCTC AACAGCTGGA ACCTCTATAT TCTCGGCTTT
TTGTTGCTCT TGGGCATGAT CACAGCCCTC ATTACAGTCT CCGGTGCCGC CCGCGCCTTT
GCCGATTGGG CAAGGCAACG TATCCGCTGT AAGCGTGACG CCAAGCTGCT GACCATGTTT
TTGGGTTGTG TGGTTTTTAT CGACGACTAC TTCAATAGTC TGGTGGTGGG GTCCATTTCC
CGCCCCCTGA CTGACCGTTA CTATATTTCC CGTGCCAAGC TGGCTTATTT GCTGGACTCC
ACCGCCGCGC CTGTGTGCGT CATTTCACCG GTTTCCAGCT GGGGAGCCTA CATCATCGCA
CTGATTGGCG GCATTCTTGC CAGCCATGGG ATGAGCGATG CGGGTCATCT GTCGGTATTC
ATTCAGATGA TCCCGATGAA CTTCTACGCC ATTTTCGCGC TGTTATTGCT GCTGTGTGTG
GCCTTTATGG GGTTGGATGT GGGTCCAATG AAGACCCATG AGCAAAACGC CATGCGTGGC
AATTTGTACG ATGAAGCCAA GGGCACACCG CCGGGCGCCA GTGCTGAACT GCCGGAGGCC
GATACAGGCC ACATCGCGGG TCTCTTTGTG CCCATCAGCA CCCTGGTATT TGCCACCTTG
TTTTTTATGA TCCAAAGCGG CGCTTCGGCC CTTGCCGATG AAAAACTGCC GTTTTCGCTG
ATTGGCGCTT TTGAGAAAAC TGATGTGGGC GGCTCACTGT TCTTCGGTGC GTTGGTTGGC
CTGGGGGTCA CTCTGGTACA GGCCATGGTG CAAAAGCTTG AGAGCAAGCT GATAATCACC
GCACTCACTC AGGGTGCCCG CTCCATGGTG CCTGCCATTT ACATTCTGCT GTTTGCCTGG
ACCATTGCCG GTATTATCGG CGAGCTGGAA ACCGGCAAGT TTATGGCGAG TCTCGCCAGC
GGCAATATTC CCTTTGCGCT GCTGCCGGCG GTGATGTTTG TGCTCGCCGG GCTCACCGCC
TTTGCCACAG GTACTAGTTG GGGCACTTTC GGCATTATGC TGCCGATTGC CGCCGACATG
GCCATGGGCA GTCACACCTC CATGATGCTG CCGATGCTGG CGGCTGTGCT GGCCGGTGCC
GTATTTGGCG ACCACTGCTC GCCGATATCC GATACCACGA TTCTGTCGTC CACCGGTGCC
AGCTGCCATC ACATCGACCA TGTGGTGACT CAGCTGCCTT ACGCGCTGAT TGTGGCGGTG
ATCAGTTTGG CTGGCTATAC CGTGATGGGC TTTACCGAGT CAGTATGGGC AGGATTTGGT
ACCAGCTCAG TGCTCTTTGT GCTGTCGGTG ATTGGCCTCA GGATCAAGGC AGGAAAAGGC
TGA
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| Protein sequence | MTLISYADSA LSLLPPVVAI VLAVLTRKVL LSLGLGILTG TLLLNDFAPL ASAEFLAHRV
TNLVWSDGAL NSWNLYILGF LLLLGMITAL ITVSGAARAF ADWARQRIRC KRDAKLLTMF
LGCVVFIDDY FNSLVVGSIS RPLTDRYYIS RAKLAYLLDS TAAPVCVISP VSSWGAYIIA
LIGGILASHG MSDAGHLSVF IQMIPMNFYA IFALLLLLCV AFMGLDVGPM KTHEQNAMRG
NLYDEAKGTP PGASAELPEA DTGHIAGLFV PISTLVFATL FFMIQSGASA LADEKLPFSL
IGAFEKTDVG GSLFFGALVG LGVTLVQAMV QKLESKLIIT ALTQGARSMV PAIYILLFAW
TIAGIIGELE TGKFMASLAS GNIPFALLPA VMFVLAGLTA FATGTSWGTF GIMLPIAADM
AMGSHTSMML PMLAAVLAGA VFGDHCSPIS DTTILSSTGA SCHHIDHVVT QLPYALIVAV
ISLAGYTVMG FTESVWAGFG TSSVLFVLSV IGLRIKAGKG
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