| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1170 |
|---|
| Symbol | |
|---|
| ID | 4603422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 1427757 |
|---|
| End bp | 1428680 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639780517 |
|---|
| Product | electron transfer flavoprotein, alpha subunit |
|---|
| Protein accession | YP_927047 |
|---|
| Protein GI | 119774307 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2025] Electron transfer flavoprotein, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000857296 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTC TCGTCCTTGC AGAACATGAT AACGCCAGCC TGAAACTGGA TACCGCCAAG
GTTGTGAGTG CCGCCAAGGC CATCGGTGGT GAGGTTCACC TGCTGGTTGC TGGCCATAAC
TGTGGTGCTG TTGCTGACGC CGCTGCCGCC ATCGACGGCG TTGCCAAGGT GTTGGTTGCC
GACAATGCTG CCTATGCTGC GCATCTGGGT GAAAACCTGG CCGCGCTGAT GCTGGATTTG
GCTGGCAATT ACAGTCACAT TCTGGCTGCC GCCAGCTCCA TGGGTAAAGA TGCGCTGCCA
CGGGTTGCCG CACTGCTCGA TGTAGCTCAA CTTTCCGAAG TGGTTAAGGT AGTTGATGCC
AATACTTTTG TGCGCCCTAT CTATGCCGGC AACGCCATGG CAACTGTGGA GAGCCTGGAT
GACAAGAAGG TCATGACGGT TCGTCCCAGT GCCTTCGATG CCGCTGCGAA TGGTGGCAGC
GCTGCCATTG AAGCACTGGA TAAGGTCTTT ACCGCCAAGA GCGCCTTTGT ATCCCAGGAG
CTGACTGTTT CTGAGCGCCC AGAGCTGGGT AATGCTGGCA TTATCGTGTC CGGTGGCCGT
GGTATGGGCA GTGGTGAAAA CTTTACCCTG CTGGAAAAAC TGGCCGACAA GCTCGGCGCC
GCCGTGGGCG CTTCCCGCGC CGCCGTTGAC GCAGGCTTTG TGCCCAACGA TTTGCAGGTG
GGTCAAACCG GTAAGATTGT GGCGCCTCAG CTTTACATTG CCGTGGGTAT CTCCGGCGCC
ATCCAGCATC TGGCGGGTAT GAAAGACTCC AAGGTGATTG TGGCCATCAA CAAAGACCCG
GAAGCGCCTA TCTTCCAGGT GGCGGATTAT GCCTTGGAAG CCGACCTGTT TGAGGCAGTC
CCCAAGCTGA TAGACTTGCT TTAA
|
|---|
| Protein sequence | MSILVLAEHD NASLKLDTAK VVSAAKAIGG EVHLLVAGHN CGAVADAAAA IDGVAKVLVA
DNAAYAAHLG ENLAALMLDL AGNYSHILAA ASSMGKDALP RVAALLDVAQ LSEVVKVVDA
NTFVRPIYAG NAMATVESLD DKKVMTVRPS AFDAAANGGS AAIEALDKVF TAKSAFVSQE
LTVSERPELG NAGIIVSGGR GMGSGENFTL LEKLADKLGA AVGASRAAVD AGFVPNDLQV
GQTGKIVAPQ LYIAVGISGA IQHLAGMKDS KVIVAINKDP EAPIFQVADY ALEADLFEAV
PKLIDLL
|
|---|
| |