Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1169 |
Symbol | |
ID | 4603421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1427006 |
End bp | 1427755 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639780516 |
Product | electron transfer flavoprotein, beta subunit |
Protein accession | YP_927046 |
Protein GI | 119774306 |
COG category | [C] Energy production and conversion |
COG ID | [COG2086] Electron transfer flavoprotein, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000191925 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAC TGGTGCCTGT AAAGCGCGTG GTGGATGCCA ACGTGAAAGT GAGGGTGAAG GCCGATAACA CAGACGTGGA CACGGCTAAC CTCAAGATGG CGATTAACCC CTTTTGTGAA ATTGCCGTTG AAGAAGCAGT TCGCCTTAAA GAAGCGGGTC ATGCCAGCGA AATCGTGGTG GTGAGCGTGG GAAGCAAGGC AGTACAGGAG CAAATGCGTA CTGCCATGGC CCTTGGCGCT GACCGTGGCA TTCACGTCGA AGCCGACGAC AACCTGCCTG CCATTTCCAT TGCCAAGATT TTAAAAGCCG TACAGGACAA AGAGCAGGCC CAACTGGTGT TGCTGGGTAA ACAGTCCATC GACGGTGATA ACAATCAAAC CGGTCAAATG CTGGCGGCGC TGATGGATGC CCCTCAGGCA ACATTTGCTT CCAAAGTGGT GGTAGAAGGC GGTGAGCTGC TGGTGACCCG CGAAGTGGAT GGTGGTCTGC AAACCCTTAA GCTGCCCATG CCAGCCATTG TGACTTCTGA CCTGCGTCTC AATGAGCCTC GCTACGCCAA GTTGCCCGAT ATCATGAAAG CCAAGCGCAA ACCGCTCGAT ACCCTGAGCC CTGCCGATCT GGGTGTCACC CTGAAGCAGC ATCATAAGCT GCTCAGTGTG GCTGCGCCTG CAACCCGTCA GGCTGGTATC AAGGTGTCTT CCGTTGAAGA GCTGGTGGAA AAACTGAAAA ACGAAGCAAA GGTGATCTGA
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Protein sequence | MKILVPVKRV VDANVKVRVK ADNTDVDTAN LKMAINPFCE IAVEEAVRLK EAGHASEIVV VSVGSKAVQE QMRTAMALGA DRGIHVEADD NLPAISIAKI LKAVQDKEQA QLVLLGKQSI DGDNNQTGQM LAALMDAPQA TFASKVVVEG GELLVTREVD GGLQTLKLPM PAIVTSDLRL NEPRYAKLPD IMKAKRKPLD TLSPADLGVT LKQHHKLLSV AAPATRQAGI KVSSVEELVE KLKNEAKVI
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