Gene Sama_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1169 
Symbol 
ID4603421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1427006 
End bp1427755 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content54% 
IMG OID639780516 
Productelectron transfer flavoprotein, beta subunit 
Protein accessionYP_927046 
Protein GI119774306 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000191925 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAC TGGTGCCTGT AAAGCGCGTG GTGGATGCCA ACGTGAAAGT GAGGGTGAAG 
GCCGATAACA CAGACGTGGA CACGGCTAAC CTCAAGATGG CGATTAACCC CTTTTGTGAA
ATTGCCGTTG AAGAAGCAGT TCGCCTTAAA GAAGCGGGTC ATGCCAGCGA AATCGTGGTG
GTGAGCGTGG GAAGCAAGGC AGTACAGGAG CAAATGCGTA CTGCCATGGC CCTTGGCGCT
GACCGTGGCA TTCACGTCGA AGCCGACGAC AACCTGCCTG CCATTTCCAT TGCCAAGATT
TTAAAAGCCG TACAGGACAA AGAGCAGGCC CAACTGGTGT TGCTGGGTAA ACAGTCCATC
GACGGTGATA ACAATCAAAC CGGTCAAATG CTGGCGGCGC TGATGGATGC CCCTCAGGCA
ACATTTGCTT CCAAAGTGGT GGTAGAAGGC GGTGAGCTGC TGGTGACCCG CGAAGTGGAT
GGTGGTCTGC AAACCCTTAA GCTGCCCATG CCAGCCATTG TGACTTCTGA CCTGCGTCTC
AATGAGCCTC GCTACGCCAA GTTGCCCGAT ATCATGAAAG CCAAGCGCAA ACCGCTCGAT
ACCCTGAGCC CTGCCGATCT GGGTGTCACC CTGAAGCAGC ATCATAAGCT GCTCAGTGTG
GCTGCGCCTG CAACCCGTCA GGCTGGTATC AAGGTGTCTT CCGTTGAAGA GCTGGTGGAA
AAACTGAAAA ACGAAGCAAA GGTGATCTGA
 
Protein sequence
MKILVPVKRV VDANVKVRVK ADNTDVDTAN LKMAINPFCE IAVEEAVRLK EAGHASEIVV 
VSVGSKAVQE QMRTAMALGA DRGIHVEADD NLPAISIAKI LKAVQDKEQA QLVLLGKQSI
DGDNNQTGQM LAALMDAPQA TFASKVVVEG GELLVTREVD GGLQTLKLPM PAIVTSDLRL
NEPRYAKLPD IMKAKRKPLD TLSPADLGVT LKQHHKLLSV AAPATRQAGI KVSSVEELVE
KLKNEAKVI