Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1168 |
Symbol | |
ID | 4603420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1425587 |
End bp | 1425979 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639780515 |
Product | H-NS family DNA-binding protein |
Protein accession | YP_927045 |
Protein GI | 119774305 |
COG category | [R] General function prediction only |
COG ID | [COG2916] DNA-binding protein H-NS |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.827071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAT TCCTCGAAAT TTTGACCCAC GGTCGTCGTC TGAAAGCAGC TGTTAAAGAT TTGTCTTTGG ATGAGCTGCG TGATCTTGGC GCCAAACTCG AAAAAATCAT TGTTGAGCGC GAAGCCGAAG CCGAAGAAGA ATTGAAAGCC AACGCCGAGC GTATTGCTAA AATTGAAGAA ATCCGCAAGC AAATGGCCGA AATCGGTCTG TCTGTTGAAG ATTTGGGCGT GACTGCAGCA AAACCAGCCG CGAAGAAGCG CGCTCCCCGT CCACCAAAAT ATAAGATTGT GGTTGACGGT GAAGAAATCA CCTGGACCGG TCAGGGCCGC ATGCCAACGG TATTCAAGAA CGCCGTTGAA GGTGGCGCGT CCATGGATGA CTTCCTCATC TAA
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Protein sequence | MSEFLEILTH GRRLKAAVKD LSLDELRDLG AKLEKIIVER EAEAEEELKA NAERIAKIEE IRKQMAEIGL SVEDLGVTAA KPAAKKRAPR PPKYKIVVDG EEITWTGQGR MPTVFKNAVE GGASMDDFLI
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