| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1167 |
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| Symbol | |
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| ID | 4603419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1422385 |
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| End bp | 1425441 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780514 |
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| Product | amidohydrolase-like domain-containing protein |
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| Protein accession | YP_927044 |
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| Protein GI | 119774304 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAATA ACAATAATTT GGCAGTGCTG CTGATAGGTT TGACACTTGT CGCCACCCAC
AGCAACGCAA AAACACTACT CACCTCGGAC CCTACTCCCC TGATTGCACT GCAAGGCGCC
AAATTACATC TGGCTCCGGG GCAAACCCTG GAAAAAGGCA CACTGCTCAT TGAAGGCAAC
CGTATAAAAG CAGTACTGAC AGGAAACGAC ATTCCTGCTG GTGCTCGGGT AGTTGAAATG
GCGGGCCTGG ATATCTATCC CGGGTTTATC GACCCCTTTA CCCAATATGG CATTAGTTTT
GAGTATCCCA CCGAAACCAA AAGTTCGCCG GTATACGAAA TAAAACGTAT CGGGGGTAAT
GCTGCCAACG GTGCCGTGCA CGCTGAGAAA CAATGGTCTC AGTATTTCGC TCCCGATAAA
GAAGCCGCAC TAAGCTGGAT AAATAACGGC TTTACCAGTG TGCAATCGGC AAAGTTGGAC
GGCATTTTTC GCGGTCAGGG TGTGCACGTA TCGCTGGCCG ATAAAATTGC CAACGAAGTG
GTGTATCGGG CCCAAGCCAA TCATTATCTC TCTTTCGACA AAGGCAGCTC TGCGCAGGAT
TACCCAAGTT CCCTGATGGG TGCCATGGCC CTTATCCGCC AGACCTTTAT GGATGCGGCC
TGGTATAACG AAAATCGCAG TAAACTCTCA GCCGCCGTCG CCCCAGGCCA GCTGGAATTC
AACGCAGCCC TGCAGGGGCT GGGCAATACT CAAGCGCAAT ATTTTATTTT TGATACGCCC
GATCTGAATA ATCAGCAGCG CGCATCGGCG CTAATGCGTG AATTCAAATT AAAAGGCGCG
TTATTGGGGA ACGGCCGGGA ATATGCCCGG ATTGATGAAA TAAAAGCAAA GGGTTACCCA
CTGATATTGC CACTGAGTTT TCCGGCAGCA CCCGATGTCA GCCAGCCAGG TACAGAATAT
CAATTGAATC TGGCAGATTT ACGCCACTGG GAAAGAGCCG CTGGTAACGG CCAGGCTCTG
GAGCAAGCCG GTATAGGCTT TGCGCTGACG CTTCATGGTA TAGAAGACAA AAAAGATTTC
TGGCCAAGGT TACAAAAAGC AATAAAAGCG GGTCTGAGCG AACAAACCGC ACTGGCGGCA
CTCACCACCC AGGCAGCCAG TATTGCCGGC ATATCCGATA CTGCGGGCAA GCTGAATCCG
GGCTTTGTTG CAGATCTCGC CATTTATCAG GGCAATCCCT TCAGTGATGG AAAGTTGGTG
AGCGTGTTTT TGCAGGGGCA GGAAAAAGTC ATTATCCCGC GGGATCAACT CGCAGTGACG
GGCAGCTACA CAGTCACCAT TAACAACCAA CCCGTGCCAT TCGAGGTATC TTATGATCAG
GGGCTGACAT TCAAGGTTGC GGACAAATCG GCGCCCCTCA CTGGGACAGG TATGCCACTC
ACTACCCGCG TCGAACTGCC CGGGCTCGAT GGCAAGCCCA GACTTACTCT CGATTTGCAC
ACGCTTAAAG CCGTTGCTTA CGCCGACGAC GGCACCCAAA CGCCTTTGAC GCTGGCAAAA
GTAGATACCA AAAATGCTTC CAACTCTCTG GCCGACACAT CCGGGCCCGA GGCCAGCAGC
TACGTGGGTA AACTCACCTC TCCCAACGTG GCCTTTGGCC TGGCATCTTT ACCAGAACAG
GACAAGGTGC ACATTCAGGG AGCCACACTC TGGACGTCAG AGTCACAGGG CATACTCGAA
AATGCCGACA TCATCATCAG CAAAGGTAAA ATCCTGTCTA TCGGCACCCG ATTGATGACG
CCGCCCGGCT ATCAGCGCAT CGATGGCACA GGCAAGCATG TAACTGCCGG TATCGTGGAT
GAACACTCAC ATATTGCCCT CAATGGCGGC ACCAACGAAG GCACTGATGC AGTCACCTCT
GAAGTCCGTA TCGGCGATGT ACTGGATCCG GAAGACGTGT CGCTGTATCG CTCCCTCGCT
GGGGGCGTGA CCACGGCGCA GATCCTCCAC GGCAGCGCCA ATCCCATCGG TGGTCAGAGC
CAGTTAATTA AACTGCGCTG GGGTGAAAAC GCCGAAGGTC TCAAGTACCA GGGGGCCCCG
GCCAGCATCA AGTTTGCCCT CGGAGAAAAC GTCAAACAGA GCAACTGGGG AGACAATTTC
ACCATACGTT TCCCCCAAAG CCGTATGGGT GTTGAGTCTG TCATGGCCGA TGCCTTCGAT
GCCGCCCGTG AATACCAGCG TGACATCAAG GCCTTTAACG CCCTGGATAA ACGCAGCCAG
GCAGAACGTG TCAGTCCCCG CCCCAACCTC AGACTCGACG CTGTAGCAGA AGTGCTGGAC
AAAGGGCGTG ACGTCCATAT TCACTCCTAT GTGCAGTCAG AGATCCTGAT GTTCCTTCGT
CTCGCCGAAA CCTACGGTTT CAAGGTGAAG GCCTTTACCC ATGTGCTCGA AGGGTACAAG
GTGGCCAAGG AGCTCGCTGC CCATGGTGCA GGCGCATCCA CCTTCTCCGA TTGGTGGGCC
TATAAGTTTG AGGTGTACGA CGCCATAGTG CAGAACGCCT GCCTGATGCA TCAGGCGGGA
GTGCTAACGA GCCTCAATTC CGACAGCTTT GAAATGCAGC GCCGTCTCAA TCAGGAAGCG
GCCAAATCGA TGATGTACTG CGATATGTCA GCAGAAGATG CCTGGAAGAT GATCACCATC
AACCCCGCCA GGCAGTTGGG TATCGATAAG GAAACCGGGT CGCTCAAAGA AGGTAAAGTC
GCCGATCTGG TACTCTGGGA TGCCAATCCC CTGTCGGTCT ATGCCCGCAC CGAAGCCGTG
TGGATTGATG GCAAGCGCTT TTATGACAGG GAAACCGACA AGCAAATGCA GGCAGCCCAG
GCAAGCGAGC GTCAGGCACT GGTGGCAAAA ATCCTGTCAC TGGATGAATC CGAAAAAGCC
GGTGAAAAGT CAGAACAAAA ACAAGAGCCG TTATGGCATT GCGATAGTCA TTACATCGCC
TTTGGCACCC GGGCCAGTCA TCTGGGTGCC CAACATCAGC ATCAAGGAGC ACACTAA
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| Protein sequence | MINNNNLAVL LIGLTLVATH SNAKTLLTSD PTPLIALQGA KLHLAPGQTL EKGTLLIEGN
RIKAVLTGND IPAGARVVEM AGLDIYPGFI DPFTQYGISF EYPTETKSSP VYEIKRIGGN
AANGAVHAEK QWSQYFAPDK EAALSWINNG FTSVQSAKLD GIFRGQGVHV SLADKIANEV
VYRAQANHYL SFDKGSSAQD YPSSLMGAMA LIRQTFMDAA WYNENRSKLS AAVAPGQLEF
NAALQGLGNT QAQYFIFDTP DLNNQQRASA LMREFKLKGA LLGNGREYAR IDEIKAKGYP
LILPLSFPAA PDVSQPGTEY QLNLADLRHW ERAAGNGQAL EQAGIGFALT LHGIEDKKDF
WPRLQKAIKA GLSEQTALAA LTTQAASIAG ISDTAGKLNP GFVADLAIYQ GNPFSDGKLV
SVFLQGQEKV IIPRDQLAVT GSYTVTINNQ PVPFEVSYDQ GLTFKVADKS APLTGTGMPL
TTRVELPGLD GKPRLTLDLH TLKAVAYADD GTQTPLTLAK VDTKNASNSL ADTSGPEASS
YVGKLTSPNV AFGLASLPEQ DKVHIQGATL WTSESQGILE NADIIISKGK ILSIGTRLMT
PPGYQRIDGT GKHVTAGIVD EHSHIALNGG TNEGTDAVTS EVRIGDVLDP EDVSLYRSLA
GGVTTAQILH GSANPIGGQS QLIKLRWGEN AEGLKYQGAP ASIKFALGEN VKQSNWGDNF
TIRFPQSRMG VESVMADAFD AAREYQRDIK AFNALDKRSQ AERVSPRPNL RLDAVAEVLD
KGRDVHIHSY VQSEILMFLR LAETYGFKVK AFTHVLEGYK VAKELAAHGA GASTFSDWWA
YKFEVYDAIV QNACLMHQAG VLTSLNSDSF EMQRRLNQEA AKSMMYCDMS AEDAWKMITI
NPARQLGIDK ETGSLKEGKV ADLVLWDANP LSVYARTEAV WIDGKRFYDR ETDKQMQAAQ
ASERQALVAK ILSLDESEKA GEKSEQKQEP LWHCDSHYIA FGTRASHLGA QHQHQGAH
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