Gene Sama_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1163 
Symbol 
ID4603415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1419322 
End bp1419936 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content55% 
IMG OID639780510 
Productacetyltransferase 
Protein accessionYP_927040 
Protein GI119774300 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTG ATGATTTTCG TGAGCAGCAT AAAAAGCGGC TCTCCTGGAT GCCATGGCTG 
TATTTTTCAT TGAAAGACAA ACACAAAGCC TGGGCTCTTC CCTGGCAGGC CGATATTCAG
GCCAGGCTGA TGCAACTGGA AACCGTGCAC ATCGGCAGCC AGTGTTTTGT GGCTCCGGAA
GCGGAGCTCT TCGCCGAGCC CGGCCGCGAT ATCCGCATCG GGAACCAATG TATGATTGCC
GCTGGCGTGT TTATTCACGG TCCGGTTGAA ATGGGCGATG AAGTGGCCAT CAACCACGGC
AGCTCTCTGG ATGGTGGGCG TGTGGGCATC AACATTGGCA GCAGAACCCG CATCGCCAAT
AATGTGACCA TTTACGCCTT TAATCACGGC ATGGCCCCCG ATGAGCCCAT CTATACCCAA
AAGGTCAGCT CCAAAGGCAT TGTGATAGGC GAAGATGTGT GGATTGGCGC ACAGGCCGGC
ATTGTGGATG GGGTGACTAT AGGCAATCAT GCCGTCGTGG GTATGGGTGC TATAGTGACA
AGGGACGTTG CGCCCTACAG CATAGTCGCA GGCAATCCCG CCAGACCAAT TGGCGACAGG
CGCGACAAAA GGTGA
 
Protein sequence
MTADDFREQH KKRLSWMPWL YFSLKDKHKA WALPWQADIQ ARLMQLETVH IGSQCFVAPE 
AELFAEPGRD IRIGNQCMIA AGVFIHGPVE MGDEVAINHG SSLDGGRVGI NIGSRTRIAN
NVTIYAFNHG MAPDEPIYTQ KVSSKGIVIG EDVWIGAQAG IVDGVTIGNH AVVGMGAIVT
RDVAPYSIVA GNPARPIGDR RDKR