| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1152 |
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| Symbol | lpxB |
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| ID | 4603404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1402156 |
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| End bp | 1403337 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780499 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_927029 |
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| Protein GI | 119774289 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0153837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.773654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAT CCAAGCCACT TGTGTTTGCC ATGGTCGCCG GAGAACTCTC CGGCGATATT
TTAGGTGCCG GTTTAGTTAA AGCACTCAAA GCCCGACATC CCGACGCCCG CTTTGTCGGT
ATCGGTGGTC CCCGTATGGA GGCGCTTGGA TTCGAGTCCC TTTTTGCCAT GGAAGAGCTG
GCTGTGATGG GGATAGTCGA AGTCCTCTCC CGCCTGCCAA GACTCTTGAA GGTACGCTCC
TCTCTGGTAT CTCAACTGCT TGCACTTAAG CCCGATTGCT TTATTGGCAT AGACGCGCCG
GATTTCAATA TCGGTGTCGA GCTGAAACTT AAGCAACAGG GTATCAAGAC GGTGCACTAT
GTCAGCCCCT CCGTGTGGGC CTGGCGGCCA AAGCGTATCT TCAAGATAGC CAAGGCCACC
AACATGGTGT TGTCCTTGTT GCCGTTTGAG AAAGCCTTTT ACGACCAGCA TCAGGTTCCC
TGTACCTTCG TGGGGCATAC CCTGGCCGAT GATATCCCCC TTGAGCTCAG TAAAGCCGAT
GCCCGTGAAA CTCTGGGGCT CGATAGGGAT GCTGAATATC TGGCGATACT CCCGGGCAGC
CGCGGCGGTG AGCTTAAAAT GCTCAGTGAA CCTTTTATTA AGGCCGCCGT TGCCATTAAA
GAGGCTTTGC CTGATGTTCG CTTTATTACC CCCCTGGTGA ATGAGAAGCG CCGCGAGCAG
TTCCTTACCG CCCTTGAAAC CCATGCCCCC GGGCTTGAAA TTCAGCTCTT TGATGGTCAA
AGCCGTGAAA TTATGGCCGC CAGTGACGGC ATACTGCTGG CGTCGGGCAC AGCGACCCTC
GAAGCCATGT TGGTAAAGCG TCCCATGGTC GTCGCCTATC GGGTGGCGCC ACTCACGTAC
AGTATTGCCA GTCGCATGAT GCTGATTAAA CGTTATTCGT TGCCCAACCT CCTATCCGGT
AAGGATCTGG TTCCTGAGCT CATTCAGGCC GATTGCACGC CACAGAAGAT TGCCTCCGAA
GTGGTTGCCA TGATGAACCG GGATAACAGG GCACTGATTG CCGAATTTAC CGAAATGCAT
CAAAACCTCA GGCAAAATGC CAGCGAGCGG GCTGCCGATG CGGTCGATGT GCTGATTGGT
GCCAATGCGC CACATGGCCG CAGCTCCAAT GAGGTGGGTT GA
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| Protein sequence | MSQSKPLVFA MVAGELSGDI LGAGLVKALK ARHPDARFVG IGGPRMEALG FESLFAMEEL
AVMGIVEVLS RLPRLLKVRS SLVSQLLALK PDCFIGIDAP DFNIGVELKL KQQGIKTVHY
VSPSVWAWRP KRIFKIAKAT NMVLSLLPFE KAFYDQHQVP CTFVGHTLAD DIPLELSKAD
ARETLGLDRD AEYLAILPGS RGGELKMLSE PFIKAAVAIK EALPDVRFIT PLVNEKRREQ
FLTALETHAP GLEIQLFDGQ SREIMAASDG ILLASGTATL EAMLVKRPMV VAYRVAPLTY
SIASRMMLIK RYSLPNLLSG KDLVPELIQA DCTPQKIASE VVAMMNRDNR ALIAEFTEMH
QNLRQNASER AADAVDVLIG ANAPHGRSSN EVG
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